| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1194 |
|---|
| Symbol | |
|---|
| ID | 4027005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 1369175 |
|---|
| End bp | 1369972 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637966371 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_573249 |
|---|
| Protein GI | 92113321 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0165031 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGC GAACGCTTGC GCGCGGTCTC GCCGGTATCT GGTGGGTGAC GCTGGTTTTC
CTCTACGCGC CACTCCTGGT GATCGTGCTG TTTTCCTTCA ACTCGGCCAA CAGCACAGCC
GTTTTCGAAA ACTTCTCGCT GGCCTGGTAC CGCAGGCTGT TCGGCAACGA GCAGATCATC
AGTGCCTTCG GCAACAGCCT GGTGCTGGCG GTGAGCTCCT CGGTCGTGGC GCTGGTGGTG
GGGTGCCTGA TTGGCTATGG CATGTACCGA CATCGCCATC GCAAACTGGG CTGGCTGATC
GTCTTGATCT ATCTGCCTAT CGTGCTGCCG GATATCGTCT TCGGCATTTC CGAGATGGCC
TTCTTCGTGC AGATTCATGA ATGGACCGGC CTGCTGCAAC CAGGGCTCGG CACCATGATC
ATCGCGCATG TGACGTTCCA GATTCCGTTC GTGGCACTGA TCGTCTACTC GCGCTTCGTG
GGCCTGGACC CGACCCTGTT CGAAGCTGCC AAGGACCTCT ATGCGTCGCC GGTCAAGCGC
GTGGTACATT TCATGGTACC GACCATCAAA CCGGCGCTGA TTTCCGCCTT TTTCCTGTCG
TTCACGCTGT CGATCGACGA CTTCGTGATC AGTTTCTTCA CGGCAGGACC GGAAAGCGCC
ACCTTGCCCA TCTATATCTG GAGCGCCATC AAGAAGGGAG TGACGCCCGA AATCAATGCG
ATCGCCACCC TGATGATCGG TGCGGTGGCC ATGGCCGCGA TACTCAGCAT GCTGTTCAAC
CGGCAGGGAC GCCGCTAG
|
|---|
| Protein sequence | MKKRTLARGL AGIWWVTLVF LYAPLLVIVL FSFNSANSTA VFENFSLAWY RRLFGNEQII
SAFGNSLVLA VSSSVVALVV GCLIGYGMYR HRHRKLGWLI VLIYLPIVLP DIVFGISEMA
FFVQIHEWTG LLQPGLGTMI IAHVTFQIPF VALIVYSRFV GLDPTLFEAA KDLYASPVKR
VVHFMVPTIK PALISAFFLS FTLSIDDFVI SFFTAGPESA TLPIYIWSAI KKGVTPEINA
IATLMIGAVA MAAILSMLFN RQGRR
|
|---|
| |