Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_1180 |
Symbol | |
ID | 4026991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 1352578 |
End bp | 1353381 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637966357 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_573235 |
Protein GI | 92113307 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGATC GCGTCAATCA GATACAGACC AATGAGAGCT GGCAGAAAAA CCTGGGTGTC CTCATCGAGC ATCAGCGATT GCGCAGCTTT CCGGTGATGC TGGAAGCCTT CCTGTCGACC CTGTGCTGCT TCGACACGAT TCTGTTGCTG ACCTACAAGA AATCGCTGCG GCCGATTCTC GTCCATCCTT CCGATCCGGC GGAGCAGAGC GATACCCTGC GGCAGTACAT CAACCACGCC TATGTCCTCG ACCCGCTTTT TCATGCCATC AAGAACACCG CCTCACCCGG CATCGTGCGC CTTGCCGATA TCATGCCGGA TTCCTTCAAG AGTACCGAGT ACTACCAGAC CTGCTACCAG AATTTCGGAC TGGTGGATGA GATCAATCTC TTGATCCATC TCGATGACGA GGTGACCTGC GCCATCACGC TCGGGCGGAA GGCCTCGCTG GAAAGCATTT CGCGCATCGA GCTGAACGCC TTGCAGGACT TTCACCCGAT CATCAGCGCG CTCATGCGTC AGTTCTGGCA GACGCAGTCC GACGAGTTCC TGCAGTATGG CCGCTCCGAC GGCCCCATGA AGCGCGCCTT GCGTACTTTC GCCAGCGGCG TGCTGACGCA GCGAGAGCGC GAGATCACCG ACCTCATACT CCGCGGCTTT TCCTCCCAGG CGATTGCCGA CCACCTGAAA ATCAGCGTCG GTACGGTCAA GGTGCACCGC AAGAACATCC ATGCACGACT GAACACCTCC ACCCAGGCGG AGATCTTCAC ACAATTCATC AACCACCTGA GTCACCTGGA ATAG
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Protein sequence | MRDRVNQIQT NESWQKNLGV LIEHQRLRSF PVMLEAFLST LCCFDTILLL TYKKSLRPIL VHPSDPAEQS DTLRQYINHA YVLDPLFHAI KNTASPGIVR LADIMPDSFK STEYYQTCYQ NFGLVDEINL LIHLDDEVTC AITLGRKASL ESISRIELNA LQDFHPIISA LMRQFWQTQS DEFLQYGRSD GPMKRALRTF ASGVLTQRER EITDLILRGF SSQAIADHLK ISVGTVKVHR KNIHARLNTS TQAEIFTQFI NHLSHLE
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