Gene Csal_1033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1033 
Symbol 
ID4027804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1163025 
End bp1163942 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content67% 
IMG OID637966210 
ProductRpiR family transcriptional regulator 
Protein accessionYP_573089 
Protein GI92113161 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGCCG ATACGCCCGT TCTGCCGCCC CGGCGCTACG CCGATCTGCA ACTGTTGGCG 
CTGCGCGCTC GGGATGGGGA TGTCCCCGAG CTGAAGCTGT CCGCCAAGGG GGTGGCACTG
CTCGAGGCGT TGCTGGCCCA GCCGGAGGCG GTGAGCCTGT CGAGCATCTC GCAGCTGGCG
CAGCGTCATG GGGTTCACCC TTCCCGCTTG ACGCGCCTGT CGCATGCGCT CGGCCTCGAG
GGGTTCAAGG CGTTGCAGAC GCTGTTCCGC GACGACCTCA GCGATAGCGC CTTTTATTCC
ACGCGCGCTC AGCGTCTGCT CGAGTTCGGT GAAACGCCCC GTGCCGAAGG CGCCGAGCTC
GCCGATGACC GCATGCTGTG GCAGCAGGAA ATGCAGAACC TCTCGGCGGC GGTCGAGGCG
CTGGATACGG CACAACTGGC GCGGGCGGCG GTTGCCATCC AGCGAGCGCG ACGCGTGCAT
GTGGTCGGGC TGCGTGCCAG TTTCGGGGCC GCGCATTACC TGGCGTACTA CCTGGACTAT
CTACGCGATG GCGTGCAGCT GGTCTCGCCC CAGGCGGGCG TGAGCGTCGA GCAGGCCCTG
CGGCTGGGTG AAGACGATCT GGTGATCGGC ATCGCCTTTC GGCCCGAGTC GCGAATGAGC
GTCGATTACT GCCGGCTGGC CGTAGAGCAG GGCGCCTCGC TGCTCGCCTT GACCAATCAC
TCCGCCTCGC AACTCGCCGC CCTGACCGAG CTGACGCTGC TGGCGCCGGC CGAAGGGGCA
TTCTTCTTCA ACCCCATGAG CAGCCTGTTC ATGCTCGTGG AACTCCTGTT GTCCCGCGTG
GCCCGCGACA TGGGACACGA CGCGGTGCTG GCCCTGCGTC AGCGCGAGGC GCTGATCTCG
CGCTTGCATG TCGAATGA
 
Protein sequence
MPADTPVLPP RRYADLQLLA LRARDGDVPE LKLSAKGVAL LEALLAQPEA VSLSSISQLA 
QRHGVHPSRL TRLSHALGLE GFKALQTLFR DDLSDSAFYS TRAQRLLEFG ETPRAEGAEL
ADDRMLWQQE MQNLSAAVEA LDTAQLARAA VAIQRARRVH VVGLRASFGA AHYLAYYLDY
LRDGVQLVSP QAGVSVEQAL RLGEDDLVIG IAFRPESRMS VDYCRLAVEQ GASLLALTNH
SASQLAALTE LTLLAPAEGA FFFNPMSSLF MLVELLLSRV ARDMGHDAVL ALRQREALIS
RLHVE