Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_1033 |
Symbol | |
ID | 4027804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 1163025 |
End bp | 1163942 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637966210 |
Product | RpiR family transcriptional regulator |
Protein accession | YP_573089 |
Protein GI | 92113161 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCGCCG ATACGCCCGT TCTGCCGCCC CGGCGCTACG CCGATCTGCA ACTGTTGGCG CTGCGCGCTC GGGATGGGGA TGTCCCCGAG CTGAAGCTGT CCGCCAAGGG GGTGGCACTG CTCGAGGCGT TGCTGGCCCA GCCGGAGGCG GTGAGCCTGT CGAGCATCTC GCAGCTGGCG CAGCGTCATG GGGTTCACCC TTCCCGCTTG ACGCGCCTGT CGCATGCGCT CGGCCTCGAG GGGTTCAAGG CGTTGCAGAC GCTGTTCCGC GACGACCTCA GCGATAGCGC CTTTTATTCC ACGCGCGCTC AGCGTCTGCT CGAGTTCGGT GAAACGCCCC GTGCCGAAGG CGCCGAGCTC GCCGATGACC GCATGCTGTG GCAGCAGGAA ATGCAGAACC TCTCGGCGGC GGTCGAGGCG CTGGATACGG CACAACTGGC GCGGGCGGCG GTTGCCATCC AGCGAGCGCG ACGCGTGCAT GTGGTCGGGC TGCGTGCCAG TTTCGGGGCC GCGCATTACC TGGCGTACTA CCTGGACTAT CTACGCGATG GCGTGCAGCT GGTCTCGCCC CAGGCGGGCG TGAGCGTCGA GCAGGCCCTG CGGCTGGGTG AAGACGATCT GGTGATCGGC ATCGCCTTTC GGCCCGAGTC GCGAATGAGC GTCGATTACT GCCGGCTGGC CGTAGAGCAG GGCGCCTCGC TGCTCGCCTT GACCAATCAC TCCGCCTCGC AACTCGCCGC CCTGACCGAG CTGACGCTGC TGGCGCCGGC CGAAGGGGCA TTCTTCTTCA ACCCCATGAG CAGCCTGTTC ATGCTCGTGG AACTCCTGTT GTCCCGCGTG GCCCGCGACA TGGGACACGA CGCGGTGCTG GCCCTGCGTC AGCGCGAGGC GCTGATCTCG CGCTTGCATG TCGAATGA
|
Protein sequence | MPADTPVLPP RRYADLQLLA LRARDGDVPE LKLSAKGVAL LEALLAQPEA VSLSSISQLA QRHGVHPSRL TRLSHALGLE GFKALQTLFR DDLSDSAFYS TRAQRLLEFG ETPRAEGAEL ADDRMLWQQE MQNLSAAVEA LDTAQLARAA VAIQRARRVH VVGLRASFGA AHYLAYYLDY LRDGVQLVSP QAGVSVEQAL RLGEDDLVIG IAFRPESRMS VDYCRLAVEQ GASLLALTNH SASQLAALTE LTLLAPAEGA FFFNPMSSLF MLVELLLSRV ARDMGHDAVL ALRQREALIS RLHVE
|
| |