Gene Csal_0958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0958 
Symbol 
ID4026735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1075956 
End bp1076846 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content61% 
IMG OID637966135 
Productprotoheme IX farnesyltransferase 
Protein accessionYP_573014 
Protein GI92113086 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) 
TIGRFAM ID[TIGR01473] protoheme IX farnesyltransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.110799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATGCTCA AACCCTTCGT CTCCATCACC AAGCCGGGCA TCATCTTCGG CAATCTGATT 
TCCGTGGCCG GGGGGTTCTT CCTCGCTTCA CAAGGGAGCG TGGATGGTGG GCTCTTCCTG
GCCACGGTCA TCGGCATTGC GCTGGTGATT GCCTCGGGGT GCGTGTTCAA TAACTACATC
GATCGCGATA TCGATCGGCT CATGGAGCGC ACCCAGGGGC GTGTCACGGT GCAGGGCTTG
ATCCCGCCCG GCGTCACCCT GGCCTACGGT GGTGTGCTGG GGGTCGCGGG CTTCTCTGTC
CTGTGGTTCG GCACCAATGC ATTGGCGACG GCGTTCGCTC TGCTCGGTTT CGTCGTCTAT
GTCGGGTTGT ACAGCCTGTA TCTGAAACGG CATTCCATCT ATGGGACGCT GGTAGGCAGC
CTGTCCGGCG CGGCACCACC GGTGGTGGGC TACTGTGCCG TCAGCGGGCA ATTCGACCTG
GGTGCCTTGA CCCTGCTCTT GATCTTCTGT CTGTGGCAGA TGCCGCATTC CTATGCGATC
GCCATCTTCC GCTTTCACGA CTATCGCGCG GCGTCGATCC CCGTGCTGCC GGTCGAGCGC
GGTGTACGGG CGGCGAAGCA TCATATCTTC TGGTACATCC TGGCGTTTCT GGGGGCGACC
CTGATGCTCA CGCTGGGAGG CTATGCCGGG TATGGTTACT TCGCGGTCGC GGCGGCCATG
GGGCTTTACT GGCTCGTCAT GGCGCTTCGC GGCTATCGCG CCGGTGACGA TCAGGTCTGG
GCCAAGAAGG TGTTCATCTT CTCGATATTC ACCATCACGG CACTGAGCAT CATGATGTCG
ATCGACTTTC AGGTCACGGA GACCGAAGTG CTGATGACAT CGCTGCGTTG A
 
Protein sequence
MMLKPFVSIT KPGIIFGNLI SVAGGFFLAS QGSVDGGLFL ATVIGIALVI ASGCVFNNYI 
DRDIDRLMER TQGRVTVQGL IPPGVTLAYG GVLGVAGFSV LWFGTNALAT AFALLGFVVY
VGLYSLYLKR HSIYGTLVGS LSGAAPPVVG YCAVSGQFDL GALTLLLIFC LWQMPHSYAI
AIFRFHDYRA ASIPVLPVER GVRAAKHHIF WYILAFLGAT LMLTLGGYAG YGYFAVAAAM
GLYWLVMALR GYRAGDDQVW AKKVFIFSIF TITALSIMMS IDFQVTETEV LMTSLR