Gene Csal_0577 details

Gene Information

• Locus tag: Csal_0577
• ID: 4026314
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chromohalobacter salexigens DSM 3043
• Kingdom: Bacteria
• Replicon accession: NC_007963
• Strand: +
• Start bp: 639686
• End bp: 640288
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637965745
• Product: RNase HII
• Protein accession: YP_572638
• Protein GI: 92112710
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0164] Ribonuclease HII

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0535045
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGATT TTCCGCCACT GGTGATCGAC TACCACGGCT CGCGCCTGGC GGGTGTCGAC 
GAAGTCGGTC GCGGCCCCCT GGTGGGGGCC GTGGTCGCGG CCGCCGTGAT CCTCGATCCG 
GCTCGTCCCA TCGAGGGGCT GGCCGATTCC AAGACCCTCA GCGAGAAACG CCGCCTGGCC 
CTGGCGGACG CCATCCGCGA GCAGGCCGCG GCGTGCGCGG TGGCCGAGGC GTCCGCCGAG 
GAGATCGATG CGCTCAATAT CTTTCATGCC ACGCACCTGG CCATGCGCCG GGCCATCGAT 
GCCTTGCCCG TGACGGCGGA ATATCTGCTG GTGGACGGCA ATCGGATGCC GGGGCATCAT 
GTGCCGGGGC AGTGCGTGGT CAAGGGCGAC CGCCGCCATG CGGCGATCGG GGCCGCCTCG 
ATTCTCGCCA AGGTGACGCG CGACGCCCAG ATGGTCGCGC TGCACGAACG CCACCCCGAG 
TATGGTTTCG CGCGCCACAA GGGCTATCCT ACCCGAGAGC ATCTCGCGGC CCTCGAACGC 
CTGGGGCCGT TGGAGGAACA CCGCCGCTCC TTTGCGCCGG TCAAGCAATG GCAGCTGCTG 
TAG 

 

Protein sequence

MTDFPPLVID YHGSRLAGVD EVGRGPLVGA VVAAAVILDP ARPIEGLADS KTLSEKRRLA 
LADAIREQAA ACAVAEASAE EIDALNIFHA THLAMRRAID ALPVTAEYLL VDGNRMPGHH 
VPGQCVVKGD RRHAAIGAAS ILAKVTRDAQ MVALHERHPE YGFARHKGYP TREHLAALER 
LGPLEEHRRS FAPVKQWQLL