| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0414 |
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| Symbol | rpoB |
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| ID | 4025878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 466359 |
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| End bp | 470435 |
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| Gene Length | 4077 bp |
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| Protein Length | 1358 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637965572 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_572475 |
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| Protein GI | 92112547 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.431195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTACT CATACACTGA GAAAAAACGC ATCCGCAAGG ATTTCGGCAA ACTGCCCCAA
GTGATGGATG TGCCTTACCT GCTGGCCATT CAGCTTGATT CCTACTTCGA CTTCCTCCAG
CAGGACCGGG CGATCGAAGA ACGTCTCGAC GTCGGCTTGC ATGCTGCTTT CAAGTCCGTG
TTCCCGATCG AGAGCTTTTC CGGCAATGCC GCTCTCGAGT ATGTCAGCTA TCGCTTTGGC
ACCCCGGCGT TCGACGTCAA GGAATGCCAA CTGCGTGGCG TGACCTATTC GGCGCCGCTG
CGGGTCAAGG TGCGCTTGAT CATCTATGAC AAGGACTCGT CCACCAAGGC GATCAAGGAC
ATCAAGGAGC AGGAAGTCTA CATGGGGGAA ATCCCCCTGA TGACCGAGAA CGGTACCTTC
GTCGTCAACG GTACCGAGCG CGTCATCGTC TCCCAGCTCC ATCGCTCGCC GGGTGTGTTC
TTCGACCACG ACAAGGGCAA GAGCCACTCG TCCGGCAAGC TGCTGTACTC CGCGCGTATC
ATTCCGTATC GCGGTTCCTG GCTGGATTTC GAGTTCGATC CCAAGGACAA CGTCTACGTG
CGTATCGACC GTCGCCGCAA GCTGCCGGCC ACGGTGCTGC TGCGTGCGCT GGGCATGAGC
GCCGAGGAGA TCCTCGAGAC ATTTTTCGAC ACCAGCACCT TCCATATCGA GAAGTCGGGC
TTCAGTGTCG AACTGGTGCC TTCGCGGCTG CGCGGTGAAA CGGCCACCTT CGACATCAAG
GATGGCGAGG GCAACCTCAT CGTCGAGGAA GGTCGCCGGA TTACCCAGAA GCACATTCGC
CAGATGGAAA AAGCCGGCCT CGAGCGTCTC GACGTGCCGA TGGAGTACCT GTTCGGCAAG
ACCCTGGCCA AGGATCAGGT CGATCCGAAC ACCGGCGAGC TGGTCTGCGA ATGCAATACC
GAGATCACCC CCGAGCTGCT CGAGAAGATC GGGCAGGCGG GGATCACGAC GCTCGAGACG
CTGTATACCA ACGACCTCGA CACGGGGCCG TTCGTCTCCG ATACGTTGAA GATCGACACC
ACGCACTCTC AGCTCGAGGC GTTGGTCGAG ATCTATCGCA TGATGCGTCC CGGCGAGCCG
CCCACCAAGG AAGCGGCCGA GACGCTGTTC CACAACCTGT TCTTCACCGA GGACCGTTAC
GACCTCTCGG GCGTCGGTCG GATGAAGTTT AATCGCCGCC TGCGCCGTGA AGGCGACACG
GGCTCCGGCG TGCTCGACAA CCAGGACATC CTCGATGTCA TGCGCGAGCT GATCAATATC
CGTAACGGCT TCGGCGAAGT CGACGATATC GATCACCTGG GCAACCGCCG CATCCGCTGC
GTCGGCGAGA TGGCCGAAAA CCAGTTCCGC GTGGGCCTGG TGCGCGTCGA GCGTGCGGTC
AAGGAGCGTC TCTCCATGGC GGAGAGCGAA GGCCTGATGC CGCAGGACCT GATCAACGCC
AAGCCGGTGG CGGCCGCGGT CAAGGAGTTC TTCGGCTCCA GCCAGCTGTC GCAGTTCATG
GACCAGAACA ACCCGCTTTC CGAGGTCACG CACAAGCGTC GCGTGTCCGC GCTCGGGCCG
GGTGGTCTGA CCCGCGAACG CGCCGGTTTC GAGGTCCGCG ACGTTCACGC GACCCACTAT
GGTCGCCTGT GTCCGATCGA GACGCTGGAA GGCCCCAACA TCGGCCTGAT CAACTCGTTG
GCGACCTACA GTCACACCAA CAGCTATGGT TTCCTCGAGA CGCCGTATCG CAAGGTGGTT
GACCGCCAGG TCACCGATGA GGTCGTGCAC CTGTCGGCCA TCGAGGAAGG CGACTTCATC
ATCGCCCAGG CTTCGGCCAC GGTGGATGAG TCCAACAAGC TGACCGACGA CCTGGTGCAG
GTCCGCCACA AGGGCGAGAC GACCTTCATG GCGCCCGACA AGGTCACCCT GATGGACGTC
TCGCCGCGTC AGGTGGTGTC CGTGGCGGCG GCGCTGATCC CGTTCCTCGA GCACGATGAC
GCCAACCGCG CCCTGATGGG CTCGAACATG CAGCGTCAGG CGGTACCGAC CCTGAAGGCG
GAAAAGCCTC TGGTGGGGAC GGGCATGGAG CGCTTCGTGG CACGCGACTC CGGTGTCTGC
GCGGTAGCCC GGCGTGGCGG CGTGATCGAC TCCGTCGATG CCAAGCGCAT CGTGGTGCGG
ATCAACGAGG ACGAGATCAT CGGCGGCGAA GCGGGCGTCG ATATCTACAA CCTGACCAAG
TACGTGCGCT CCAACCAGAA CACGTGCATG AACCAGCGTC CGATTGTGCG TCCCGGCGAT
GTAGTGGCGC GCGGCGACAT CCTCGCCGAC GGTCCGTCCG TCGACATGGG GGACCTGGCG
CTGGGTCAGA ACATGCGCAT GGCCTTCATG CCGTGGAATG GCTACAACTT CGAGGACTCG
ATTCTGATCT CGGAGCGTGT GGTCGAAGAG GACCGCTTCA CCAGCATCCA CATCCAGGAG
CTGACCTGTG TGTCGCGTGA CACCAAGCTG GGCGCCGAAG AGATCTCCTC GGACATCCCC
AACGTCGGTG AGGCGGCACT CGGCAAGCTC GACGACGCGG GCATCGTCTA TATCGGTGCC
GAGGTCGGCG CGGGCGACAT CCTGGTGGGC AAGGTCACGC CCAAGGGCGA GACCCAGCTG
ACGCCGGAGG AAAAGCTCCT GCGTGCGATC TTCGGCGAGA AGGCGTCCGA CGTGAAGGAC
ACCTCGCTGC GTGCGCCGAC CGGGATGAAG GGTACGGTCA TCGACGTGCA GGTCTTCACC
CGTGACGGGG TCGAGAAGGA TTCGCGTGCG CTTTCCATCG AGCAAAGCCA GCTCGACGAA
GTGCGCAAGG ACCTTCAGGA AACCTATCGC ATCGCCGAAG AGGCGACTTT CGAGCGTCTC
AAGCGCGCCC TGATCGGTCA GCCGGTCAAC GGCGGGCCCA AGCTCAAGAA AGGCGACACC
CTCGACGAGG CTTACCTCGA CGAGCTGCCG CGCAGCCAGT GGTTCAAGCT GCGCATGCAG
GACGAGTCGC TCAACGAGCT GCTGGCCCAG GCCGACGAGC AGCTGGAGAA CCGTCGCAAG
GAGATGGACG AGCGTTTCGA GGACAAGAAG CGCAAGTTGA CTCAAGGCGA CGACCTGGCG
CCGGGCGTGC TCAAGATCGT CAAGGTCTAC CTGGCCGTCA AGCGTCGCAT CCAGTCCGGC
GACAAGATGG CGGGCCGCCA CGGCAACAAG GGTGTCATTT CGTCGATCAT GCCGATCGAG
GACATGCCGT TCGACGATAA CGGCGAGCCT GTCGATGTGG TGCTCAACCC GTTGGGCGTA
CCGTCGCGCA TGAACGTCGG TCAAATTCTC GAGACCCACC TGGGCATGGC CGCCAACGGC
CTCGGGGTCA AGATCGACCG CATGCTGCGT GATGCGCGTC AGCAGCAGGT CGCCGAGATT
CGTGACTTCC TGGGGCAGGT GTACAACACC GCCGAAACGC GCCAGGAGGA TATCGATTCG
CTCAGCGATG ACGAGATCAT CACGCTGGCC AAGAACCTGC GCAGCGGCGT GCCGGTCGCG
ACACCGGTGT TCGACGGGGC CAAGGAGCAT GAGATCAAGC ATCTCTTGAC CCTGGCCGAC
CTGCCGGATT CCGGTCAGAT GACGCTCTAC GACGGGCGTA CGGGCGATGC CTTCGATCGC
CAGGTGACGG TGGGCTACAT GTACATGCTC AAGCTCAACC ACCTGGTCGA CGACAAGATG
CACGCGCGTT CCACCGGTTC GTACTCGCTG GTCACTCAGC AACCGCTGGG CGGCAAGGCG
CAGTTCGGTG GCCAGCGCTT CGGCGAGATG GAGGTCTGGG CGCTGGAAGC CTACGGCGCG
GCCTACACCT TGCAGGAAAT GCTGACCGTC AAGTCCGACG ACGTGGAAGG GCGTACCAAG
ATGTACAAGA ACATCGTCGA CGGCGACCAC TCGATGCAGG CGGGCATGCC GGAATCCTTC
AACGTATTGG TGAAGGAAAT CCGCTCGCTG GGTATCGATA TCGAGCTGGA AGGCTGA
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| Protein sequence | MAYSYTEKKR IRKDFGKLPQ VMDVPYLLAI QLDSYFDFLQ QDRAIEERLD VGLHAAFKSV
FPIESFSGNA ALEYVSYRFG TPAFDVKECQ LRGVTYSAPL RVKVRLIIYD KDSSTKAIKD
IKEQEVYMGE IPLMTENGTF VVNGTERVIV SQLHRSPGVF FDHDKGKSHS SGKLLYSARI
IPYRGSWLDF EFDPKDNVYV RIDRRRKLPA TVLLRALGMS AEEILETFFD TSTFHIEKSG
FSVELVPSRL RGETATFDIK DGEGNLIVEE GRRITQKHIR QMEKAGLERL DVPMEYLFGK
TLAKDQVDPN TGELVCECNT EITPELLEKI GQAGITTLET LYTNDLDTGP FVSDTLKIDT
THSQLEALVE IYRMMRPGEP PTKEAAETLF HNLFFTEDRY DLSGVGRMKF NRRLRREGDT
GSGVLDNQDI LDVMRELINI RNGFGEVDDI DHLGNRRIRC VGEMAENQFR VGLVRVERAV
KERLSMAESE GLMPQDLINA KPVAAAVKEF FGSSQLSQFM DQNNPLSEVT HKRRVSALGP
GGLTRERAGF EVRDVHATHY GRLCPIETLE GPNIGLINSL ATYSHTNSYG FLETPYRKVV
DRQVTDEVVH LSAIEEGDFI IAQASATVDE SNKLTDDLVQ VRHKGETTFM APDKVTLMDV
SPRQVVSVAA ALIPFLEHDD ANRALMGSNM QRQAVPTLKA EKPLVGTGME RFVARDSGVC
AVARRGGVID SVDAKRIVVR INEDEIIGGE AGVDIYNLTK YVRSNQNTCM NQRPIVRPGD
VVARGDILAD GPSVDMGDLA LGQNMRMAFM PWNGYNFEDS ILISERVVEE DRFTSIHIQE
LTCVSRDTKL GAEEISSDIP NVGEAALGKL DDAGIVYIGA EVGAGDILVG KVTPKGETQL
TPEEKLLRAI FGEKASDVKD TSLRAPTGMK GTVIDVQVFT RDGVEKDSRA LSIEQSQLDE
VRKDLQETYR IAEEATFERL KRALIGQPVN GGPKLKKGDT LDEAYLDELP RSQWFKLRMQ
DESLNELLAQ ADEQLENRRK EMDERFEDKK RKLTQGDDLA PGVLKIVKVY LAVKRRIQSG
DKMAGRHGNK GVISSIMPIE DMPFDDNGEP VDVVLNPLGV PSRMNVGQIL ETHLGMAANG
LGVKIDRMLR DARQQQVAEI RDFLGQVYNT AETRQEDIDS LSDDEIITLA KNLRSGVPVA
TPVFDGAKEH EIKHLLTLAD LPDSGQMTLY DGRTGDAFDR QVTVGYMYML KLNHLVDDKM
HARSTGSYSL VTQQPLGGKA QFGGQRFGEM EVWALEAYGA AYTLQEMLTV KSDDVEGRTK
MYKNIVDGDH SMQAGMPESF NVLVKEIRSL GIDIELEG
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