| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0309 |
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| Symbol | |
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| ID | 4025965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 348947 |
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| End bp | 349966 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637965459 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_572371 |
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| Protein GI | 92112443 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00849188 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCACG CCATCTCCTA TTGCCTGCTG GGGCTCGGCC TCACCGCCGC CACCGGCGTT
CACGCCGACA CCACGTTGCG CCTGGGCCAT CTATGGCCGG CGCAGTCCGC CGTCAATCAG
GACTTGATCA AGGCCTGGGC CGATCAGGTC ACGCAAGACG CGAATGGTGC GCTCGAGGTG
GAAATCTATC CCTCGCAGAC ACTGAGCAAG GCCAGCAGCG CCTACGAGGG CGTCGTCAAC
GGCGTCGCCG ATATCACCGT CACGCTGCAG GGCTATACGG CGGGACGCTT TCCGCTCACC
GAGATCGTGC AGTTGCCGGG GGTATCGGCC AGTGCACCGC AAGGCGCCTG TATCCTGCAG
TCGCTTTACG ATGACGGGGC GTTGGGGGAC GAATACGCCG ACTCCCATCT GCTGTTCCTG
TTCACTACTG GTCCGGCACC GCTGCACACA CGCGACACGG AGGTGCAAAC GCCGGCGGAT
CTCGAGGGCC TGCGCATCCG CACGCCCAGC GAAGTCTCCA GCGACATGCT GGAAAGCATG
GGGGCCGACC CGGTGGGCAT GCCGGCACCG GACATCTACA CCTCGCTGCA GCGTGGCGTG
ATCGATGGTC TGAGCCTTCC CTGGGAAGCC ATGAAGGTCT TCCAGGTCAA CGAACTGGCC
AGCTATCACC TGGATATTCC CTACTACACG GGCGCCTTGA TGGCGACCAT GAATCGCGAT
GCCTACGAGG CGCTGTCGCC GGAAGCACGC GAGGCCATCG ATGCCAATAC CGGCATGGGC
TGGGCAGAGA AGGCGGGCGA GGTCTTCTAT CGACTCGATA GCGAAGGCAA GGCGCAGGCA
CGCGAGCAGG GCGACACCAT CCACCACGTC GAGGACCCCC TGAACGATCC GCAGTGGTCA
GGTCCCTTGA AGCGTGGTAC CGAGCGCTAC CTCGAACGCC TGGAGGAACG CGGCATCGAC
AACGCACGAG CGGTATACGA GCAGGCGCTG TCCCTGCGGG ATGGTGCCTG CGCCCGCTGA
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| Protein sequence | MKHAISYCLL GLGLTAATGV HADTTLRLGH LWPAQSAVNQ DLIKAWADQV TQDANGALEV
EIYPSQTLSK ASSAYEGVVN GVADITVTLQ GYTAGRFPLT EIVQLPGVSA SAPQGACILQ
SLYDDGALGD EYADSHLLFL FTTGPAPLHT RDTEVQTPAD LEGLRIRTPS EVSSDMLESM
GADPVGMPAP DIYTSLQRGV IDGLSLPWEA MKVFQVNELA SYHLDIPYYT GALMATMNRD
AYEALSPEAR EAIDANTGMG WAEKAGEVFY RLDSEGKAQA REQGDTIHHV EDPLNDPQWS
GPLKRGTERY LERLEERGID NARAVYEQAL SLRDGACAR
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