Gene Csal_0270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0270 
Symbol 
ID4026359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand- 
Start bp306921 
End bp307532 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content66% 
IMG OID637965420 
Producttripartite ATP-independent periplasmic transporter DctQ 
Protein accessionYP_572332 
Protein GI92112404 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCACCC TGCTCGCCGG ACTCGCCCGG CTCAATCGAG CGCTCGAGCG TCTGCTCGGC 
GCTCTCCTGT TGCTGCTGCT GGCGGCCTTC ATCGTGTTCA TCGTCTATCA GATCGTCAGC 
CGCAACCTCC CCATGCTGCC GCGTCTGTAC TGGACCGAGG AGTTCAGTCG CTTCGCCTTT 
CAGTGGATGA TCATGCTGGG CACCGCCATC GGCGTGCTGC ATGCCGATCA CTTCGTCCTC 
GAAGCCTTTC CCCGCGGCTC CCGGCTCGAC CGGGCGACGC GCCTGATCCG TGATCTGGCC 
TGCCTGGCGG TCGGCGTCGT GTTCGTCTAT TACGGCAAGG ACTTCGCGCT CTCCGGGCTT 
CGCCGCAGCG CCACGGCCTC CAGGCTGCCG ATGATCGCGG TGTACGTCAC GTTCAGCGTG 
TGCGGCGTCC TGATCATCCT GTTCGCCGCG CAACGTCTCC TGCATGCGGC CCTGCATGGC 
CAGTCGGCCA TGGAGCAGAC GCTGGACACG CCCTCCGAAC TCGACGAGGC CCTGGCCGAT 
ACCGCCGAGA CGCCCTCCGA TTCGCTCAGC GCCCCCGAGC ATCGCGACGG CGGCAAGGAG 
TCTTCCCGAT GA
 
Protein sequence
MPTLLAGLAR LNRALERLLG ALLLLLLAAF IVFIVYQIVS RNLPMLPRLY WTEEFSRFAF 
QWMIMLGTAI GVLHADHFVL EAFPRGSRLD RATRLIRDLA CLAVGVVFVY YGKDFALSGL 
RRSATASRLP MIAVYVTFSV CGVLIILFAA QRLLHAALHG QSAMEQTLDT PSELDEALAD 
TAETPSDSLS APEHRDGGKE SSR