Gene Csal_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0042 
Symbol 
ID4027221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand- 
Start bp50225 
End bp50875 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content67% 
IMG OID637965194 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_572106 
Protein GI92112178 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCAAC AGTTCCTGCT GGTCGCCGGA GCGCACTTCC TCGCCCTGCT CAGCCCTGGT 
CCGGACTTTT TCCTGATACT GCGCTACGCG ATCGCCTTGG GCCGCGGGCC GGCGGCGCTG 
GTCAGCCTCG GCATCGGCCT GGCCAACGGC CTGTTCATTC TGCTCGCCAT GGGTGGGCTC 
ATGGCCCTGG ACGCCGAAGC CGTCCTATTC ATCGCCGTCC AGTGGGCCGG CGGTGTCTTT 
CTGCTTTACA TGGGCATCCA GTTCATTCGC CAGGCGGGAC AGACTCGTCT CGAGGCAGGC 
TCGCACCGCG AGGCAGAAGC CCCTGCGAGC ACCGCGCCGG GCGCCTTGCT CGCCGGGCTG 
GCCTCGGGGT TGCTGAACCC CAAGAATGCG CTGTTCTATG CCAGCCTGTT CGCAGTGCTT 
CACGCGCGCA GCACGCCTGC TGGCGTCCAG AGTCTCTACG CGTTGTGGAT GATCGCTGTG 
GTACTCGGCT GGGATCTGCT GGTTGGTCAC TTGGCCGGCC ATCCGGTGCT GATCCGTCGT 
TTCGGCCATG GCCTGCGACA CATCGAGCGG CTGGCTGGCG CCCTGCTCAT CCTGCTGGGG 
CTCGGCATCA TCGCAGCCCG GCTCGACCCA GGGCTGCTCG CGGCCTTCTG A
 
Protein sequence
MLQQFLLVAG AHFLALLSPG PDFFLILRYA IALGRGPAAL VSLGIGLANG LFILLAMGGL 
MALDAEAVLF IAVQWAGGVF LLYMGIQFIR QAGQTRLEAG SHREAEAPAS TAPGALLAGL 
ASGLLNPKNA LFYASLFAVL HARSTPAGVQ SLYALWMIAV VLGWDLLVGH LAGHPVLIRR 
FGHGLRHIER LAGALLILLG LGIIAARLDP GLLAAF