| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7159 |
|---|
| Symbol | |
|---|
| ID | 8363353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 8945096 |
|---|
| End bp | 8946622 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644969294 |
|---|
| Product | TROVE domain protein |
|---|
| Protein accession | YP_003126761 |
|---|
| Protein GI | 256426108 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTCA ACAAGCTCAA AACTATCAAA CAAGTAGTCA ACCATGCAGG AGCAGCGGCA
TACACCCTGA CACCTGAAAT GGAACTGTAC AGTGCTGTAG TTACTGCTTC TCTGCAAGAC
CAGTTTTATG AGAAAAGCAC AGAGAAGCTG GAACGTCTGC GTACACTGAT CGCTAAAAAT
GATCCTGGAT TCGTAGCAAG ACTTGCAGTC TACACCAGGG AAAGGATGTA TCTGCGTTCA
GTACCAACGG TATTGACAGT GGAACTGGCT AAAGTGCACA AAGGAGACAA CCTGGTAGGT
AAACTGACAG GACGCGTTAT CCAGCGGGCC GACGAGATTA CAGAAATACT GGCCTACTAT
GCAGTGGCAA ACGAAAGGAA AGAGACTAAA AAGCTCAATC ACCTGAGTAA GCAGCTGCAA
AAAGGACTCG CTGTTGCTTT CAACAAATTC GACGAATACC AGTTCGCTAA ATATAACCGT
AAGACGGATA TCACCTTGAA AGATGCGCTG TTCATTGTAC ATCCGAAAGC AAAGGATGAC
GCACAGCAGG CACTGTTCAA TAAGATAGTA GAAGATAACC TGGATACGCC TTATACATGG
GAAACTGCAT TATCCGCAGC TGGTCAGGCG AAATACGATT CTGAATACGC TAAAAAAGAA
GCTTTCAAAT GGGTATGGAC GGAACTGATA GAAAGCGGAA AACTGGGATA TATGGCGGCA
TTGAGAAACG TGCGTAACAT GCTTGATTAC AATGTCGATA CACAATACCT GAAGAAGGTA
TTTCAAATGC TGGCCGATAA AAAGGCTGTC ATGAATGCAA AACAGTTGCC ATTCCGTTAC
CTGTCTGCCT ACAGAGAGAT TAAGAATATC CGGCACGGTT ATATCACCGA ACTGAAAAGA
GCACTGGAAA AAGCATTACA GACCAGCGTA GCACACCTGA AAGGATTTGA CGAGTATACA
AAGGTTGTCA TCGCGTGCGA CGTTTCCGGT TCCATGCAGC AACCAATATC TGCAAAGAGC
ACCGTTTTAC TGTATGACAT CGGTCTCTTA CTGGCCATGT TGTTACAACA TAAATGTAAG
CACGTCGTGA CAGGTATGTT CGGTGATTCC TGGAAAACAG TGAGTATGTC TCCGGATAAT
ATTCTCGGCA ACATCGATGA ATTCTACAGA CGAGAAGGTG AAGTGGGTTA TTCCACGAAT
GGTTACCTGG TGCTGGATGA TCTGATCAAT AAAAGATATG TAGCTGATAA GATTATGTTG
TTTACCGACG GACAGTTGTG GGATAGCAAT ACGGGTAATA CCAGTGCATC CAACAGCATG
TCAGCTAAAT GGACAAAATA CAAGCAGATA GCGCCAAACG CAAAGCTTTA CCTGTTCAAT
CTGGCGGGTT ACAATACCGT ACCGCTGGAT GTGCGTCAGG ATGATGTTTT CCTCATTGCG
GGATGGAGTG ACAAGATCTT CGGAGTCCTG GATGCGATTG ACAAAGGAGG AGACGCCATC
ACTGAAATTG CCGGCCTTGC TTTATAG
|
|---|
| Protein sequence | MRFNKLKTIK QVVNHAGAAA YTLTPEMELY SAVVTASLQD QFYEKSTEKL ERLRTLIAKN
DPGFVARLAV YTRERMYLRS VPTVLTVELA KVHKGDNLVG KLTGRVIQRA DEITEILAYY
AVANERKETK KLNHLSKQLQ KGLAVAFNKF DEYQFAKYNR KTDITLKDAL FIVHPKAKDD
AQQALFNKIV EDNLDTPYTW ETALSAAGQA KYDSEYAKKE AFKWVWTELI ESGKLGYMAA
LRNVRNMLDY NVDTQYLKKV FQMLADKKAV MNAKQLPFRY LSAYREIKNI RHGYITELKR
ALEKALQTSV AHLKGFDEYT KVVIACDVSG SMQQPISAKS TVLLYDIGLL LAMLLQHKCK
HVVTGMFGDS WKTVSMSPDN ILGNIDEFYR REGEVGYSTN GYLVLDDLIN KRYVADKIML
FTDGQLWDSN TGNTSASNSM SAKWTKYKQI APNAKLYLFN LAGYNTVPLD VRQDDVFLIA
GWSDKIFGVL DAIDKGGDAI TEIAGLAL
|
|---|
| |