Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_7130 |
Symbol | |
ID | 8363323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 8919823 |
End bp | 8921160 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644969264 |
Product | putative deaminase |
Protein accession | YP_003126732 |
Protein GI | 256426079 |
COG category | [F] Nucleotide transport and metabolism [R] General function prediction only |
COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTCTA CTCATATTTC CAGGAAAGAT TTTATCAGAA ATTCTGCACT CGCCACATTA GGACTGGGTA TCACACCTTC CCTGCTGTCG GATGTAAAAG CTGCAAACCC ACACGAAACA AACACGATCG CTGGTAGTAA GAATCTGAAA CTGAAGAATG TACGCCTGGA AACAGGATTT GAATATGAAG GCGATGAAGT GATCGCTACC AAAACCGGAC TATTCTGCGT TGAAATAGCC AATGGAAAAA TCACCGCTAT TCTGCCTAAT GCCCCAAAGG CCAATGCAAC AGATGCCAAA GGTCTCCTGA TGCTGCCTGC TTTCAAAGAC ATGCACATCC ACCTGGATAA AACCTTCTAT GGTGGTCCAT GGAAAGCTGC CAGAAGAAAA CAGGGCGGTG TAAAAGGAAT GATCGCACTG GAGCAGCAGA TCCTTCCGGA AATGCTGAAA ACCTCCACCG ATCATGCAGA AAAATTAATC GCATTATTGC AGTCCTGTGG CTCCAGCTTT GCCCGGAGCC ACGTCAATAT CGAACCTACC TCCAAACTGG ACTCTCTTAA AAACCTACAG AAAGCGCTGG AAAATAAAAA AGACTCCTTT GGTGCAGAAC TGGTCGCTTT TCCACAACAC GGACTGTATT ATGCAGATTC TACTTCCCTG ATGAAAGAAG CGGCTAAGAT GGATATTGAT TTTATCGGAG GAGTAGACCC TTATTCGCTG GACGGTGAGA TTGCCAAACC GATGGACTTC ATTGTTAAAC TGGCACTGGA TAATAACAAA GGGATTGACA TCCACCTGCA TGAATCAGGA GATTCCGGAT TGAAAACGGT CGAATACCTG ATAGACAGGG TCAATGAAAA TCCCGTTCTG AAAGGAAAAA CCTTCCTGAG TCATTGCTTC GTATTGGGTA AACTGGAAAA ACAGAAACAG GAAGAAATTG CAGATAAACT GGCGCAGGCA GAAATCGGGA TTATGTCTAC GATCCCTTTC GGCGGATTGA TCATGCCGAT TCCTACGTTG TACAAATACG GTGTAACGGT CGGTACGGGG AATGACAGTA TTATTGATCA CTGGAATACC TGGGGCCTGG GTAGCGTGCT ACAGAAAGCC AATCTGATGG CTCAGCTATA TGGCAATTCC ACAGAATTCC TCCTGTCACG TAGTCTCAGA CTGGCTACCT ACAACATCCT GCCACTCGAT GACAAAGGGC AGCAACAGTG GCCAAAGAAA GGCGATGCTG CCGATGTGGT ACTGATTGAT GCCAGTTGCT CGGCAGAAGC AGTATCCAGG ATATCTCCTG TCAGGTCATT GATCCATCAG GGCAAGATTG TCTTCTGA
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Protein sequence | MRSTHISRKD FIRNSALATL GLGITPSLLS DVKAANPHET NTIAGSKNLK LKNVRLETGF EYEGDEVIAT KTGLFCVEIA NGKITAILPN APKANATDAK GLLMLPAFKD MHIHLDKTFY GGPWKAARRK QGGVKGMIAL EQQILPEMLK TSTDHAEKLI ALLQSCGSSF ARSHVNIEPT SKLDSLKNLQ KALENKKDSF GAELVAFPQH GLYYADSTSL MKEAAKMDID FIGGVDPYSL DGEIAKPMDF IVKLALDNNK GIDIHLHESG DSGLKTVEYL IDRVNENPVL KGKTFLSHCF VLGKLEKQKQ EEIADKLAQA EIGIMSTIPF GGLIMPIPTL YKYGVTVGTG NDSIIDHWNT WGLGSVLQKA NLMAQLYGNS TEFLLSRSLR LATYNILPLD DKGQQQWPKK GDAADVVLID ASCSAEAVSR ISPVRSLIHQ GKIVF
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