| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7101 |
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| Symbol | |
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| ID | 8363293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8885900 |
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| End bp | 8887444 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644969234 |
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| Product | Sigma 54 interacting domain protein |
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| Protein accession | YP_003126703 |
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| Protein GI | 256426050 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0606] Predicted ATPase with chaperone activity |
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| TIGRFAM ID | [TIGR00368] Mg chelatase-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.746766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTTA AAACCATCGG CAGCGCCGTA CAGGGCGTAG AAGCCATTTC CATTGTTATT
GAAGTGGACG TATCACCCAA AGGCACACAA TTCCACATTG TCGGCTTACC CGACAGCGCC
GTCAAAGAAA GCGAACAACG GATAGAATCC GCTATCACAA ATATTGGCTT CCGTTTTCCA
CGCTTCCGGA CCGTCGTCAA CATGGCACCT GCCAATATCC GTAAAGCAGG TTCCGCCTAC
GATCTGCCTA TCGCGTTAGG ACTACTCGCT GCTTCTGAAC AGATAGACAG TACCGCCTTA
TCACAATTCA CCATCATGGG AGAACTATCC CTGGACGGCA CTGTACAACC CATCCGCGGC
GCTTTGCCTA TTGCCATTCA GGCGCGTAAG GAAGGTTTCA GGGGACTGAT CGTACCGGCA
TCCAATGCCA GAGAAGCTGC TATGGTGAAT AACCTGGAAG TATATGGTGT CACTCATCTG
CGGGAAGTGA TCGACTTCTT ACTGGCACCG TCTACGCTGC AACCTGTTTA TGTGGATACC
AGGACAGAAT TCGCCAATGC ACATCATCAG TTTGATGTTG ATTTCAACGA CGTAAAGGGA
CAATATACGA TCAAACGTGC ACTGGAAGTA GCAGCAGCCG GTGGACATAA TGCATTGCTC
ATAGGACCTC CCGGCGCGGG AAAAACAATG CTGGCAAGAC GTCTTTCGAC TATCCTGCCG
CCACTCAGTC TGCATGAAGC ACTTGAAACC ACTAAAATAC ATTCCGTTGC AGGAAAATTA
CCAGCCGATA CTTCGCTTGT TACGCAAAGA CCTTTCCGCG CACCACATCA TACCATCAGC
CATACCGCGC TGATTGGCGG CGGTAGTATC CCGCAGCCGG GAGAAATATC ACTGGCACAT
AACGGTATCT TATTCCTGGA TGAATTGCCT GAGTTCAGCA GACAAGCACT GGAAGTCATG
CGTCAGCCAC TGGAAGAAAG AAGGGTCTCT ATTGCACGCG CAAAATTATC CGTGGACTTT
CCCGCCAGCT TTACTTTGCT CGCATCTATG AATCCCTGCC CTTGTGGATT CTTTAATCAT
CCGGTAAAAG CCTGTACCTG TCTGCCAGGA TCCGTACAAC GCTATCTGAA CAGGGTATCC
GGTCCTTTAA TGGATAGAAT AGATCTGCAC ATAGAAGTCA CACCCGTTCC GGTTGAATCC
CTGCTGGACC ACACCTATGG AGAGTCCAGT AAGGATATCA GGGAACGTGT AATTACGGCA
AGAGAAATAC AGACAGCCCG GTTCAACGGC TATAAGGGTA TTTACTGCAA TGCACAGATG
AATAGTCAAC TGCTGAGAAA AGTATGCCGT TTAAACAGCG AAGGAGAAGA CCTGTTGAAA
AATGCAATGC AGAAACTCAA GTTATCAGCA CGGGCATATG ATCGCATTCT TAAAGTAAGC
CGTACAGCAG CAGACCTGGA AGGCAGCGAG CATATTAAAA CTGAACACCT GGCAGAGGCG
ATCCATTGCA GGAGCCTTGA CAGACAAGAT TGGTGGGATA AATAG
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| Protein sequence | MIVKTIGSAV QGVEAISIVI EVDVSPKGTQ FHIVGLPDSA VKESEQRIES AITNIGFRFP
RFRTVVNMAP ANIRKAGSAY DLPIALGLLA ASEQIDSTAL SQFTIMGELS LDGTVQPIRG
ALPIAIQARK EGFRGLIVPA SNAREAAMVN NLEVYGVTHL REVIDFLLAP STLQPVYVDT
RTEFANAHHQ FDVDFNDVKG QYTIKRALEV AAAGGHNALL IGPPGAGKTM LARRLSTILP
PLSLHEALET TKIHSVAGKL PADTSLVTQR PFRAPHHTIS HTALIGGGSI PQPGEISLAH
NGILFLDELP EFSRQALEVM RQPLEERRVS IARAKLSVDF PASFTLLASM NPCPCGFFNH
PVKACTCLPG SVQRYLNRVS GPLMDRIDLH IEVTPVPVES LLDHTYGESS KDIRERVITA
REIQTARFNG YKGIYCNAQM NSQLLRKVCR LNSEGEDLLK NAMQKLKLSA RAYDRILKVS
RTAADLEGSE HIKTEHLAEA IHCRSLDRQD WWDK
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