Gene Cpin_7071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7071 
Symbol 
ID8363263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8848152 
End bp8848706 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content45% 
IMG OID644969204 
Productprotein of unknown function DUF179 
Protein accessionYP_003126673 
Protein GI256426020 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTCTT TGTCGCCTGG AATATTACTG ATTGCGGACC CATTCCTTAA AGATCAGAAT 
TTTGCCCGTA CCGTTGTATT ACTGTGCGAA CATCAGGAGA GTCGGGGTAG CTTTGGTTTT
GTGCTTAACA AGGTGTTTGA CCAGTCTTTG AATGAGCTTG TACCGGAAGT GCTGATAAAC
AACATCAGGG TGTATTACGG AGGACCGGTA CAGATAGACA CCATTCACTT TATACATCAG
CAGCCTGAGT TGATCAGAGG CGGGTTTGAG ATACGGGACG GCGTATATTG GGGAGGTGAG
TTTGATCAGG TCGTATCATT GATCAACAGT GGCCGTCTGG ACCTGAACAA GATCAAGTTT
TTCATAGGTT ATTCGGGATG GAGTAGCGGA CAGCTTGAGA ATGAACTCAA TGAAAAATCC
TGGATCTTAT CTGAAAGCAA TGCACCGCTT ATTTTTGAAG CAAAAGAACA GAATATATGG
CCGCAGGCAT TGAAGAACCT GGGCGCTAAC TTTGCCATCA TGGCCAATTT CCCGATAGAT
CCACTATTGA ACTAG
 
Protein sequence
MVSLSPGILL IADPFLKDQN FARTVVLLCE HQESRGSFGF VLNKVFDQSL NELVPEVLIN 
NIRVYYGGPV QIDTIHFIHQ QPELIRGGFE IRDGVYWGGE FDQVVSLINS GRLDLNKIKF
FIGYSGWSSG QLENELNEKS WILSESNAPL IFEAKEQNIW PQALKNLGAN FAIMANFPID
PLLN