| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7035 |
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| Symbol | |
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| ID | 8363227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8799449 |
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| End bp | 8800603 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644969168 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003126637 |
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| Protein GI | 256425984 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000302282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAAT TATTACCCCT GATCGTAACA TCCTTTTCGT TTACAGCCGT ATTGGCTCAG
AGCAGTAACC AGGAACAGGC GATCGCCAAA AAGAATGAGG CGATTGAATT AATGGACAAT
GGGAAACTGG CTGAATCCAT CACATTGCTC AACGAGGCCC GTAAACTGGA TCCGACACAG
ATGGACATTG TTTATGAGCT GGCGCTGGCA AAATATCAGC AGAAGGACTT TAACGATGCG
ATAAAAGATC TGAAATATCT GATCAAGCAA CATGCTGCCA ACGGGAGAGT GTATGCGATG
CTGGGGAATG TGCAGGATGA CATGGGAAAG CCGGAAAAAG CGATTGACAC GTATGACGAG
GGACTGAAGC AATTTCCGAA GGAAGGCGCT TTGTATGTGG AAAGAGGTGT TATGGAGCTG
AAAAAAGGGA ATAATGATGC GGGACTGCAT TTTTTTGAAG ATGGTATTAA GAATGCGCCT
ATGCATTCTT CCAACTACTA CCGGGCAGCT AAACACTTCC TGGATTCCAA AAATGAGGTG
TGGGGAATGA TCTATGGAGA GATCTTTATG AACCTGGAAA GAGGGTCTAA GCGTACAGAG
GAAATCAGTA AATTGTTATA CTACACGTAT AAAGGTGAGA TAAAATTCGA GTCGGATACG
GCAGCTTCCG TGAGTTTTGC AAGCAACAAT ATTGAGCTGC GGTATGACCC ATCCAAGAAA
AAGAAAGGGG ATTCCGACCT GGCGATGCAG CTATTGTCTT CCTTCGGCGG ACTTTCCTAC
GGAAATACAG TCTATGAGAA GACGCTGGCC CTGGCGGTTG TGGGAGAAAA AGCGATCAAT
GTTGCATCCC TGCACCGTAT ACGTACAAAG TTCCTGGAGC AGTATATTGC AGCAGGATAT
GACACCAGTT ATAATGTAGT CTTGTTTGAC TATCAGAAAA AGGTAAAAGA TGCCGGTCAT
TTTGAGGCAT ATAACTACTG GGTACTGGGT CAGGGAGATG AGAATGTGCT GAGTGAGTGG
GTAGGTGATC ACAAGCAGCA ATGGGATGAT TTTATCAAAT GGTTTAAAGA AAACAGGATT
CAGATAACAG ACGAAAAGAG CTTTTCCCGG ATAGGATTAA CTGTATCGGG GGCTTTGAAA
AAGGATTCGG AATAA
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| Protein sequence | MRKLLPLIVT SFSFTAVLAQ SSNQEQAIAK KNEAIELMDN GKLAESITLL NEARKLDPTQ
MDIVYELALA KYQQKDFNDA IKDLKYLIKQ HAANGRVYAM LGNVQDDMGK PEKAIDTYDE
GLKQFPKEGA LYVERGVMEL KKGNNDAGLH FFEDGIKNAP MHSSNYYRAA KHFLDSKNEV
WGMIYGEIFM NLERGSKRTE EISKLLYYTY KGEIKFESDT AASVSFASNN IELRYDPSKK
KKGDSDLAMQ LLSSFGGLSY GNTVYEKTLA LAVVGEKAIN VASLHRIRTK FLEQYIAAGY
DTSYNVVLFD YQKKVKDAGH FEAYNYWVLG QGDENVLSEW VGDHKQQWDD FIKWFKENRI
QITDEKSFSR IGLTVSGALK KDSE
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