Gene Cpin_7005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7005 
Symbol 
ID8363197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8772391 
End bp8773437 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content45% 
IMG OID644969138 
Productaminoglycoside phosphotransferase 
Protein accessionYP_003126607 
Protein GI256425954 
COG category[R] General function prediction only 
COG ID[COG2334] Putative homoserine kinase type II (protein kinase fold) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000158499 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGATA TACTGGCAGC TTATGGATTA TCAATGGCCG AATGCCTTAT TCAGCCATTC 
GGCAGTGGCC TTATCAACGC CACCTGGAAG ATCTCTGCAG GCGATCGTCA CTACATCCTG
CAACGCATCA ATCATGGGGT GTTTAAGCAG CCAACACTGA TAGCTGAAAA CATCAGCACT
ATCGGCCGCC ACCTGGATAC GTATCATCCG GCATATTTCT TTGTACAGCC GGTGCGTACC
ATCGACGGAC AGGATATGTA CATCACAACT GAAGGCGCTT ATTTCCGTAT GCAACCTTTT
GTTGCTGATT CCCGCAGTTA TGATGTGGTA GATAATGCAC AACTGGCATT TGAAGCAGCC
AGACAATTCG GTCGCTTTAC AAAACTGCTG TCAGATATTG ATATCAATAC GATTCAATAT
CCACTGCCTG ATTTTCACAA TCTCACGCTG CGTTATCAAC AGTTTGAACA GGCCATAAAA
CAAGGTAATC AGGCAAGAAT AGCAGAAGCT GCAACAGATA TTGACATGAT CCGCAGCTAT
CAGCACCTGA CAGCAACATT TAAAGCCATA CAGCAACATC CTGGTTTCAA AATGCGGGTG
ATGCATCACG ATACCAAGAT CAGCAACGTA TTATTTGATA ACGCTGATAA TGGAATCTGT
GTGATCGATC TGGATACAGT GATGCCGGGG TATTTCATCA GTGATTTCGG AGATATGATG
CGTACTTATC TTTCTCCTGT CAGCGAAGAA GAAACGGACT TCAGTAAAGT ACAGGTAAGA
ACAGATTATT ACCAGGCTAT TGTACAGGGA TATCTGAGTG AAATGAAAGA TGAACTCAGC
GGGGCAGAAA AAGCACACCT TGTGTATGCA GGACAGTTCC TGGTATATAT GCAGGCCATC
CGTTTCCTGA CGGATTATTT CAACAATGAT AGTTACTACG GCGCAAAATA TGAACGACAC
AATCTCCTGC GGGCGCGTAA CCAGCTCACA CTGCTGAACA ACATTACGCA GCAGGCACAA
ACGCTTTCTT TAGTGGCAGC AGACTAG
 
Protein sequence
MQDILAAYGL SMAECLIQPF GSGLINATWK ISAGDRHYIL QRINHGVFKQ PTLIAENIST 
IGRHLDTYHP AYFFVQPVRT IDGQDMYITT EGAYFRMQPF VADSRSYDVV DNAQLAFEAA
RQFGRFTKLL SDIDINTIQY PLPDFHNLTL RYQQFEQAIK QGNQARIAEA ATDIDMIRSY
QHLTATFKAI QQHPGFKMRV MHHDTKISNV LFDNADNGIC VIDLDTVMPG YFISDFGDMM
RTYLSPVSEE ETDFSKVQVR TDYYQAIVQG YLSEMKDELS GAEKAHLVYA GQFLVYMQAI
RFLTDYFNND SYYGAKYERH NLLRARNQLT LLNNITQQAQ TLSLVAAD