Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_7004 |
Symbol | |
ID | 8363196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 8771297 |
End bp | 8772310 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644969137 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003126606 |
Protein GI | 256425953 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000759079 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAATC CACCAACTAT AAAAGAAATC GCCAAAAGGC TCAACCTGGC CGCCTCCACT GTATCCAGGG CTTTGCACAA TCATCCGCGT ATTGGCTTGA AAACCAGGAT GCAGGTACAG GCGCTCGCCC GCGAATTGCA ATATGAGCCG AATCAGACCG CCATTTTCTT CCAGCAGAAA AAAACATTTA CCCTGGGTAT TGTACTCCCT GAACTGTCAG AAGCCTTCTT TTCCGCAGCG ATCAGCGGCA TAGAAGATAC TGCCAACAAG AGCAATTACA TGGTGCTGCT GGGCCAGTCG CATGATGACG CAACAAGAGA ACAGAAGATC GTGGAAATCA TGAAAAATCA CCGGGTAGAC GGACTGCTGG TTTCCCTGGC CAAAAACACC GTACACTACG CACATTTCGA AATGCTGCGG AAATACAATA TCCCTGTCGT ATTCTTTGAC CGGATCCCCG ATATGAAAGA TATCCACTAT GTCGCTTCGA ATATGGAATC AGGCACCATC CAGGCCGTAT CTTTCTTATT ACAGCAGGGA CATCGGGTCA TCGGTATGAT CAATGGACCT GAAAAGCTGA TCGCCAGCCG GCAACGTACA ACAGGTTACC GGAAAGCCAT GCAGCAGCAA CGCCTGAAAT ATGACGCGAC CCTCAATGTA CACAGCGATC TTACCAAAGA AGGTACGCGT CAGGCCATGC AACAACTACT CTCCAACAAA AGGAAAATAA CCGCCGTTGT CGCTTTTAAT GACTATGTCT CACAAGATGC AGTGCAATAT GCCGCTGAAC AAGGCATACA GATCAATAAA GACATCTGCT TCGTCAGTTA TGCCAATCTG CCGCTGAGTA GTTATATGGC ATATCCTCCT CTCGCCTCCG TTGAACAATA CCCCTATCTG CAAGGACAGA AAGCCACCGA AATACTCCTG GACCTCCTGT CAGGTAAACT GGCCCCGGAT GCTTATCAGC AGATCGTTGT CGACTCCAGA CTGGTCATTG CACCTGGGAA GTAA
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Protein sequence | MPNPPTIKEI AKRLNLAAST VSRALHNHPR IGLKTRMQVQ ALARELQYEP NQTAIFFQQK KTFTLGIVLP ELSEAFFSAA ISGIEDTANK SNYMVLLGQS HDDATREQKI VEIMKNHRVD GLLVSLAKNT VHYAHFEMLR KYNIPVVFFD RIPDMKDIHY VASNMESGTI QAVSFLLQQG HRVIGMINGP EKLIASRQRT TGYRKAMQQQ RLKYDATLNV HSDLTKEGTR QAMQQLLSNK RKITAVVAFN DYVSQDAVQY AAEQGIQINK DICFVSYANL PLSSYMAYPP LASVEQYPYL QGQKATEILL DLLSGKLAPD AYQQIVVDSR LVIAPGK
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