| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6962 |
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| Symbol | |
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| ID | 8363154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8723804 |
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| End bp | 8724463 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644969095 |
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| Product | 3-oxoacid CoA-transferase, B subunit |
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| Protein accession | YP_003126564 |
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| Protein GI | 256425911 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.978999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTTTAG ATAAATATGG CATTGCCAAA AGAATAGCGC AGGAACTGCG CGACGGAATG
TATGTCAACC TGGGAATCGG CATTCCTACA CTTGTCGCCA ATTTTATTCC TGCTGATATA
TCTATCATGC TGCAATCTGA AAACGGATTG CTGGGGATGG GACCTTATCC GGAAGAACAG
GACATCGATC CGGACCTGAT CAATGCAGGT AAGGAGACGG TCACTGTGCT GCCTGGAGGC
GTGTTTTTTG ACTCTGCGGA GAGTTTCGGG ATGATCAGGG CCGGCAAGGT AGACCTGACT
GTATTGGGCG CTATGGAGGT ATCTGATGCG GGAGATATTG CCAACTGGAA AATACCCGGT
AAGATGGTGA AGGGAATGGG GGGAGCGATG GATCTTGTAG CGGCTGCAAA AAATATTATC
GTTGCGATGA TGCATACGAA TCCGAAAGGA GAGAGCAAAT TACTACCAAC GTGTACGTTA
CCTCTGACAG GTGTATCCTG TGTAAAGAAG GTGGTAACGG AACTGGCTGT ACTTGATATT
ACACCTGCGG GCTTCCGTTT ACTGGAGCGT GCACCGGGCG TCAGTGTGGA AGAGATTGTG
GCGAAAACGG CGGGAAGACT TGTTGTAGAA GGGGATATAC CGGAAATGAA GTTGAATTAG
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| Protein sequence | MSLDKYGIAK RIAQELRDGM YVNLGIGIPT LVANFIPADI SIMLQSENGL LGMGPYPEEQ
DIDPDLINAG KETVTVLPGG VFFDSAESFG MIRAGKVDLT VLGAMEVSDA GDIANWKIPG
KMVKGMGGAM DLVAAAKNII VAMMHTNPKG ESKLLPTCTL PLTGVSCVKK VVTELAVLDI
TPAGFRLLER APGVSVEEIV AKTAGRLVVE GDIPEMKLN
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