Gene Cpin_6936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6936 
Symbol 
ID8363128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8686481 
End bp8687953 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content48% 
IMG OID644969069 
Productinosine-5'-monophosphate dehydrogenase 
Protein accessionYP_003126538 
Protein GI256425885 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0516] IMP dehydrogenase/GMP reductase 
TIGRFAM ID[TIGR01302] inosine-5'-monophosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.294111 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCCG GAAAATCAAA ACCGAAATTT GTAGAGGACG GACTTACCTT TGATGACGTA 
CTCCTGGTTC CAGCCTACTC TGAGGTGCTT CCCAGAGACG TAAACATCTC AACGCAACTT
ACCAAAAACA TACGCCTTAA CATACCGATG GTCTCTGCGG CCATGGATAC TGTTACTGAA
GCTAACCTGG CCATTTCACT GGCTCGTCAG GGTGGCATTG GTATTCTGCA TAAAAATATG
AGCATTGAGA AACAGGCAGA ACTGGTGAGA AAAGTAAAGC GCAGTGAAAA CGGCCTTATT
CTCGATCCGG TTACCCTGCA TGCCAATGCG ACAATAGGAG AAGCACTCCG CCTGATGAAA
GAAAACAGCA TCGGTGGTAT TCCTATTGTG GATGCAAACA GCAAACTGGT TGGTATCCTC
ACTAACCGCG ACCTGCGTTT CGAAAGAAAT CACAAACGCC TGGTTAGCGA AGTTATGACT
ACTGAAAACC TGATCACTGC ACCCGAAGGT ACCGACCTGA AGAAAGCAGA AAAGATCCTT
CAGCAGAATA AAATCGAGAA ACTGCCGGTA GTTGCCAAAA ACGGTAAACT GGTAGGACTC
ATCACTTACA GAGACATTTT ACAGGTATCC AACTATCCTA ACGCAGTAAA AGACGCTTAT
GGCCGTTTGC TGGTAGGTGC TGCACTGGGT ATCACTCCGG ATGTTCTCGA CAGAGCACAG
GCACTGATCA ATGTAGGTGT GGATGTGGTT TGTCTGGATA GCTCACATGG TCACTCCATC
GCAGTTATCA ACAGCCTGAA AAAACTCAAA AAAGCATTCC CTAAACTGGA AGTGATCGCT
GGTAACGTAG CTACAGGCGA AGGTGCAGCA GCACTGGCTG CCGCTGGCGC TGATGCGGTT
AAAGTAGGTG TCGGACCAGG TTCTATCTGT ACAACCCGTG TTGTGACAGG TGCAGGTTTC
CCTCAGCTGT CTGCCGTATT GCTCGCTGCT GAAGCACTGA AGAAAACAGG CGTTCCGGTG
ATCGCTGATG GTGGTATCCG TTATACAGGT GATATGGTGA AAGCCCTGGC AGCAGGCGCT
TCCTCTATTA TGGCTGGTTC TATCTTCGCT GGTGTGGAAG AAAGCCCTGG AGAAACTATC
ATCTACGAAG GCCGTAAATT TAAGTCTTAT CGTGGTATGG GTTCTCTGGA AGCAATGGTA
GAAGGTAGTA AAGACCGCTA CTTCCAGGAA GAAGACGATA TCAAGAAACT GGTACCGGAA
GGTATCGTAG GCCGCGTTCC TTATAAAGGA CTCCTGTCTG AAGTAATTCA GCAGTTCGTT
GGTGGTCTGC GTGCCGGTAT GGGTCTTACC GGTTCTAAAG ATATTAAAGC ATTACAGGCA
GCACAGTTCA TCAAGATCTC TCCTGCTACT GTAAAAGAAA ACCACCCGCA CGATGTGGTG
ATCACAAAAG AAGCACCGAA CTACAGCAAA TAA
 
Protein sequence
MPAGKSKPKF VEDGLTFDDV LLVPAYSEVL PRDVNISTQL TKNIRLNIPM VSAAMDTVTE 
ANLAISLARQ GGIGILHKNM SIEKQAELVR KVKRSENGLI LDPVTLHANA TIGEALRLMK
ENSIGGIPIV DANSKLVGIL TNRDLRFERN HKRLVSEVMT TENLITAPEG TDLKKAEKIL
QQNKIEKLPV VAKNGKLVGL ITYRDILQVS NYPNAVKDAY GRLLVGAALG ITPDVLDRAQ
ALINVGVDVV CLDSSHGHSI AVINSLKKLK KAFPKLEVIA GNVATGEGAA ALAAAGADAV
KVGVGPGSIC TTRVVTGAGF PQLSAVLLAA EALKKTGVPV IADGGIRYTG DMVKALAAGA
SSIMAGSIFA GVEESPGETI IYEGRKFKSY RGMGSLEAMV EGSKDRYFQE EDDIKKLVPE
GIVGRVPYKG LLSEVIQQFV GGLRAGMGLT GSKDIKALQA AQFIKISPAT VKENHPHDVV
ITKEAPNYSK