Gene Cpin_6874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6874 
Symbol 
ID8363066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8608074 
End bp8609396 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content48% 
IMG OID644969007 
Productaspartate kinase 
Protein accessionYP_003126476 
Protein GI256425823 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0527] Aspartokinases 
TIGRFAM ID[TIGR00657] aspartate kinase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.52096 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCT TAAAATTTGG TGGCACTTCC GTAGGTAAAC CGGAACGTAT GCATGCCGTG 
GCCAGTCTGG TAACTGCCGA TACCGCGCCC AAGATCGTGG TATTATCCGC GTTATCCGGT
ACTACCAACG CTTTGGTAGA AATCGGACAA TCCCTTTCTG AGGGTAAGAA GGAACAGGCA
AAGGGCCAGA TAGATAAGCT GGAAGCACAT TACAGGACTT TTTGCGAAGC CCTGGTCAAG
CTGGACGCTA CCCGTGCAAA GGCGACCGCT GTTGTTGACG AGCATTTCGA ATTCCTGAAC
ATCATTCTTA AGATATCTTT CAACGAAGCG CTGAATAAGG ATATACTGGC GCAAGGTGAA
TTACTGTCAA CCCGTCTGTT CAGCGTATAC CTGGAAGAAG CAGGCGTGCA ATCCGTAATG
CTGTCAGCAC TGGATTTCAT GAGCATCGAT GAATATGAGG AGCCTGAAAT TCCAAAGATC
AAGATCAAGC TGGGTAACCT GCTGGAAAAA CATAAAAATG AGACTGTATT CATTACCCAG
GGATATATCT GCCGCAACTC AAGAGGCGAG ATAGACAACC TGAAACGTGG TGGTAGCGAC
TATTCAGCAT CGCTGATCGG CGCAGCTATC CAGGCTAGTG AAGTACAGAT CTGGACAGAT
ATCGACGGTA TGCACAATAA CGATCCGAGA GTGGTGAAAA AGACCTTCCC GATCGAGCAG
CTGTCTTTCG ACGAAGCAGC TGAACTGGCT TACTTCGGCG CTAAGATCCT CCATCCGGCA
TCTATATGGC CTGCACAGCA CTTCAACATT CCGGTGAAAC TGCTGAACAC GATGCAGCCG
GAAGCGAAAG GTACCATCAT TACCGAACTG CCAAGCGGCG ACGGTGTGAA GGCAATCGCT
GCCAAAGACG GTATCATCGC TATCAAGATC AAATCCAGCC GTATGCTGCT GGCTTACGGT
TTCCTCCGTA AGATCTTTGA AGTGTTTGAG AAATATCGCG TACCTATTGA CATGATCACT
ACTTCTGAAG TAGCGGTTTC CCTGACAATA GAAAACACGC CTCAGCTGGA CCAGCTGCTG
AAAGAATTAC AGCCATTCGG TTCTGTTGAA CTGGATCACC ACCAGACCAT CGTATCTATT
GTTGGTAATG AAGTAGCAGC TACGCCTTCT ATCCTGAAGA AGATCTTCGA TTCACTGAAC
GAAGTGCCTT TGCGGATGAT CTCTTATGGT GGCAGCCGTC ACAACATCTC CATCCTGATC
GGTGGACAAC ACAAAGAGAA AACATTACAG CTGCTGAACA AAGGTTTGTT CAACCTGGGT
TAA
 
Protein sequence
MKILKFGGTS VGKPERMHAV ASLVTADTAP KIVVLSALSG TTNALVEIGQ SLSEGKKEQA 
KGQIDKLEAH YRTFCEALVK LDATRAKATA VVDEHFEFLN IILKISFNEA LNKDILAQGE
LLSTRLFSVY LEEAGVQSVM LSALDFMSID EYEEPEIPKI KIKLGNLLEK HKNETVFITQ
GYICRNSRGE IDNLKRGGSD YSASLIGAAI QASEVQIWTD IDGMHNNDPR VVKKTFPIEQ
LSFDEAAELA YFGAKILHPA SIWPAQHFNI PVKLLNTMQP EAKGTIITEL PSGDGVKAIA
AKDGIIAIKI KSSRMLLAYG FLRKIFEVFE KYRVPIDMIT TSEVAVSLTI ENTPQLDQLL
KELQPFGSVE LDHHQTIVSI VGNEVAATPS ILKKIFDSLN EVPLRMISYG GSRHNISILI
GGQHKEKTLQ LLNKGLFNLG