| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6821 |
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| Symbol | |
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| ID | 8363013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8545909 |
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| End bp | 8546586 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644968954 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003126423 |
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| Protein GI | 256425770 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.121688 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.121136 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCATAA CCAGGAAAGC GAAATATAGT GTTGCTATTG CCGACGACCA TGTACTGGTA
AGAAAAGCGC TTGGCAGGCT GATTAATACT TTTACGGATT ACTTCATCCT CTTTGAAGCC
AGCAACGGCG AAGAAGTAAT CAAGATCATC AATAACCGTG AGTTACAGTT ACCTGATATA
CTCATACTTG ACGTGAACAT GCCAGGCATG AACGGTTACG AAACCGCTGC CTGGATCAAT
AACCATTTCC CTCAGATCAA AGTACTCGCG CTCTCAATGC TCAATGATGA GTCGGTCATT
ATCAAAATGC TTAAATCAGG TGCAAAAGGT TATATCATGA AGAATGTAGA ACCGGATGAT
CTCAAAGAAG CATTTGATTC TATTATAAAG AAAGACTTTT ATCTGCCCGA TTATATCTCC
GGAAAAGTCA TCTCCGGTCT GCAGAAAGAC GTATTATCTC TCAGTGAGAA GATCGAACTG
ACGCCAAAGG AAAAGACATT CCTGCAATTC CTCTGTACCG AACTTTCTTA CAAGGAAATT
GCCCAGAAAA TGTTCGTCAG TCCACGTACC ATCGATGATT ATAAAAGCAG CCTCTGCGAC
AAACTGAAGG TAAAGACCCG CGTCGGACTC GTCATCTTCG GTATCAGATA CGGTCTGATA
GATATTAACA CAGACTAA
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| Protein sequence | MSITRKAKYS VAIADDHVLV RKALGRLINT FTDYFILFEA SNGEEVIKII NNRELQLPDI
LILDVNMPGM NGYETAAWIN NHFPQIKVLA LSMLNDESVI IKMLKSGAKG YIMKNVEPDD
LKEAFDSIIK KDFYLPDYIS GKVISGLQKD VLSLSEKIEL TPKEKTFLQF LCTELSYKEI
AQKMFVSPRT IDDYKSSLCD KLKVKTRVGL VIFGIRYGLI DINTD
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