| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6813 |
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| Symbol | |
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| ID | 8363005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8535255 |
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| End bp | 8537702 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968946 |
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| Product | glycoside hydrolase family 9 |
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| Protein accession | YP_003126415 |
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| Protein GI | 256425762 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.921794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00389969 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAGC TGCTCTTGCT GGTATTATCC ACATTTATCA GCCATCCCCT TCTTGCGGAC
CTGATACGTA TCAATCAACT CGGATATGCC CCCCGAGGCA GCAAGGTTGC GGTCTGGTGC
AGTAAAGAAC AAGATACATT AAAATATTTT GAACTGGTCA ACGCCGTCAC CGGCAAAGTG
GAGTATAAAG GAAAGGCAGG CAGGGCCGCA GGTGCTTATG GTCCGTTCAC CCAAACTTCC
CGGCTGGATT TCTCCTCTTT CACGTCGCCC GGGCAATATT ATCTGCAAAC CGCAAAAGCA
AAATCCCCCG CCTTTCTCAT CAGCGACAAT GCTTATAAAG GAGCAGCCGA CTTTTGTCTG
CGATATATGC GTCAGCAACG TAGCGGTTTC AATCCTTTCC TGAAAGACTC CTGCCACACA
CATGATGGCT TTCCGGTATA CAGTCCGGAT ACCACATTTA TCCCCGTTTC GGGAGGCTGG
CACGATGCAT CTGATTATCT GCAATACGTC ACCACTTCCG CTAACGCTAC CTGGCACCTG
CTGGCTGCCT GGCGTGACTT CCCAGGGGTA TTTTCAGACT CATTACAAGC AAACGGACTC
GCTGGCGGTA ATGGTATAGC CGATGTATTA GACGAGGCAA AATGGGGCCT GGATTGGCTC
ATTAAAATGA ATCCACGGGA CGACAGGATG TATAATCAGA TAGGGGATGA CAGAGATCAT
CAGGGAATGC GTATTCCTAA ACAGGATACA AACTTTTATG GCCGCGGACT CGAACGTCCT
GTCTATTTCT GTATCGGCGA ACCTCAGGGA TTGCTGAAAT ATAAAAACCG GGCTACCGGC
ACAGCTTCCA CAGCCGGGAA ATTTAGCAGC TGCTTCGCCC TCGGACAACA GTTATTCACA
AACATCTATA CCAGCTATGC TGATAGCCTT GGTCATAAGG CCAAAGCCGC CTATGCTTTC
GGTATGGCCA AACCAGGCGT TTGTCAGACC GCCCCTGGAC GCTCTCCCTA TTTCTATGAA
GAAGATAACT GGACAGATGA TATGGAGCTG GCAGCCGCTT CCCTGGGAAA AGAATACCTC
TCCAATGCGC TGGACTTTGC CCACCAGGAA CCAGTCACTC CCTGGTTAGG AAAAGATACT
GCCCGCCATT ATCAATGGTA TCCCTTCATT AACCAGGGCC ATGCAGAACT TGCCAGACAA
GTGAAAGGTC CGCAGAGAGA TACACTGATC CGTTATTACC GGGAAGGAAT AGACCGGGTA
TGGCAGAAAG CTTCCAGGAA TGCATTTTAC CGGGGTATTC CATTTATCTG GTGTAGCAAT
AACCTCACAG TTGCCTTTGC CATACAATGT TACTGGTACC GGGAGCTGAG CGGTGATAAT
ACTTATCTCC AGCTTGAACA GGCCTGCTTC GACTGGATCT TCGGATGTAA TCCCTGGGGT
ACTGCTATGG TATATGGATT ACCCGCACAC GGCGATACAC CTACAGATCC CCATTCCTCT
TTTACACACC TGAAACAGTA TCCTATTGAC GGCGGACTGG TAGACGGTCC GGTATATACC
AATATCTTCA AAAACCTGAT CGGTATCCGG TTGCAGGATG TGGATGAATA TGCCGCATTC
CAGAGTGACC TGGCCGTATA CCACGATGAC TATGGCGATT ACAGTACCAA TGAACCGACG
ATGGACGGTA CCGCGGTACT GATCTATCTG CTGGCAGCAC AGGAACATGC TGCAAGAGAA
AAAGGATACA CAGTTACACA AGGTGGTATC ACCAGGATGG ATAGTTCACA CAAGGAAATC
GCGCTGGTTT TTACGGCAGA TGAATTCGGA GAAGGACTAT CATCCATCAC ACAAACTTTA
AAACAGGGAA AGCTCAAAGG TTCCTTTTTC TTCACAGGTA ATTTTTACCG CAATCCACTC
TTCAGATCAG GTATTCAACG ATTGTATAAA GAAGGGCACT ATCTCGGCCC ACATTCAGAT
AAACACCTTT TGTATTGCGA TTGGAAAAAA AGGGATAGTC TGCTGATAAC ACAGCAACAA
TTCACAAACG ATATGCACAA CAACCTCGTT GTAATGCAGG AACTTGGTAT CGATACCGGT
AAAGTGAACT GCTTTATTCC TCCCTATGAA TGGTGGAATG ACAGCGTTGC TGCCTGGTCG
GCAAACCTAG GCTTACAGAT TGTCTGCTTT ACACCGGGTA CCGGTAGTAA TGCAGATTAT
ACATATCCTG AAATGGGAAA AACCTACAAA AGCAGCAAAA CGATCATTCA GTCTGTAAAG
ACTTTTGAGC AGCAGAGAGC GGGAAAACTG AATGGCGTTA TACTGCTGAT CCATGCAGGG
ACAGATCCCC GGAGAAGGGA TAAACTGTAC CTGCATTTAC AACAGCTGAT TAAATATCTT
AAACAAAAAG GATATCGCTT TAAAAGGGTC GATGAGGGTA CTATCTGA
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| Protein sequence | MKKLLLLVLS TFISHPLLAD LIRINQLGYA PRGSKVAVWC SKEQDTLKYF ELVNAVTGKV
EYKGKAGRAA GAYGPFTQTS RLDFSSFTSP GQYYLQTAKA KSPAFLISDN AYKGAADFCL
RYMRQQRSGF NPFLKDSCHT HDGFPVYSPD TTFIPVSGGW HDASDYLQYV TTSANATWHL
LAAWRDFPGV FSDSLQANGL AGGNGIADVL DEAKWGLDWL IKMNPRDDRM YNQIGDDRDH
QGMRIPKQDT NFYGRGLERP VYFCIGEPQG LLKYKNRATG TASTAGKFSS CFALGQQLFT
NIYTSYADSL GHKAKAAYAF GMAKPGVCQT APGRSPYFYE EDNWTDDMEL AAASLGKEYL
SNALDFAHQE PVTPWLGKDT ARHYQWYPFI NQGHAELARQ VKGPQRDTLI RYYREGIDRV
WQKASRNAFY RGIPFIWCSN NLTVAFAIQC YWYRELSGDN TYLQLEQACF DWIFGCNPWG
TAMVYGLPAH GDTPTDPHSS FTHLKQYPID GGLVDGPVYT NIFKNLIGIR LQDVDEYAAF
QSDLAVYHDD YGDYSTNEPT MDGTAVLIYL LAAQEHAARE KGYTVTQGGI TRMDSSHKEI
ALVFTADEFG EGLSSITQTL KQGKLKGSFF FTGNFYRNPL FRSGIQRLYK EGHYLGPHSD
KHLLYCDWKK RDSLLITQQQ FTNDMHNNLV VMQELGIDTG KVNCFIPPYE WWNDSVAAWS
ANLGLQIVCF TPGTGSNADY TYPEMGKTYK SSKTIIQSVK TFEQQRAGKL NGVILLIHAG
TDPRRRDKLY LHLQQLIKYL KQKGYRFKRV DEGTI
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