| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6797 |
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| Symbol | |
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| ID | 8362989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8513524 |
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| End bp | 8515440 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644968930 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003126399 |
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| Protein GI | 256425746 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000012034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000000461447 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAACCA TCATAAAAAT ATTTATCAGC ACAGCCTTAT CTATATCTCT GCTGTCGTCC
TGTAACAAAT ACCTGGATGT AGTACCTGAC GATGTCGCCA CGCTGGAAAG TGCATTTGCT
AACGCGAATG AAACCCAGGC TTATTTATTC GGATGTTATG CAACTATGCA GGCGCTTACT
GATATACGCC GTAACGCCGG CTTTACCACT TCAGGTGAGG TGATGTTCCC TTATCCATTA
CAAGACCAGA CCACACTGGG CGGTGGCGGT GGAGACGCTG GTTTCAGCAT CATGCGCGGC
ATACAGAACA GCGCCAATCC GCTTTTAAAC TACTGGGATG GTTATAACAT GGGAATTAAT
ATGTGGCAGG CTATCCGTAA ATGCAACATA TTCCTGGAGA ATGTACACAT ACCGCTTGAT
CTGCCAGAAT TTCAACGTAA GAGATGGGCA GCAGAAGCAA AATTCCTGAA AGCCTATTTT
CACTACTGGC TGATCAGAAT GTACGGACCT ATTCCGATCG TAGATGTCAA CTTACCGGTG
AATGCTTCTA TTGAAGATGT AAGAATAAAA CAACAACCGG TAGACTCCTG CTTCAATTAT
GTAGTACACT TACTGGATGA AGCGATTGTA GATCTTCCAC CGGTGATACA GAACCTTGCT
GCGGAACAGG GACGTATCAG TTCCACGATC GCAAAAGCCG TAAAAGCAGA AGTACTGGCG
ACAGCTGCAA GTCCGTTGTT CAATGGTAAC CGCGACTATG CCGCCATGAA GAGAAAGGAC
GGAACACAAC TGTTTTCACA AGCTTACGAC GAAAGCAAAT GGCAACTGGC ACTGACAGCC
TGCCGGGAAG CAATTGATGC AGCTGCTGCT GCAGGCGCTA ACCTTTATCA ACTGAGACTG
AGCGGAGGTA TTGTGCATAT GTCAGACGAA ACACGCAGAA TGCTGACAAT ACAGGGCGCT
TTTGTAGATA GCTGGAATCC TGAGCAGATA TGGACATTGA ATCCACAATT CGGCTGGCAA
TATATGGCGT CTCCAAGAGT CACTGCTGAT GCTGCTGCGA ATGTATTTGC CGTGTATTCC
AACTTCTCTG TACCTATCGG ACAGTCAGAG CTCTTCTATA GCAAAAATGG TGTACCGATC
AGTGAAGACA GAACCTTTGA TTATAAGAAC CGTTACAAAC TGCAGGCTGG TGACGATTCA
CATGCCTACT ATATCAAAAA GGGCTATACT ACTGTAAAAG GCAACTTCAA CCGCGAGCCA
CGTTATTATG CAGATGTTGC ATTCGATGGT AGTGTATGGT TTGGTTCCGG TAACCTGGAC
GACAATAATC CGAATTATGT CAATGCGGTT AACGGATTCG CAGCACCACC CGATCAGCTG
CGTTATAATG CGACCGGCTA TTGGGCAAAG AAACTGGTAC CTTATCAGAC GACCTTCGGA
CAAACAAGCG TACAACAGAA CTACTCCTGG CCATTTATGC GCCTCACCGG CCTCTGGCTC
TTATATGCAG AGTGTCAGAA TGAAGTCAAC GGACCAGGCG GCGATGCACT CCTCTGGATT
GACAGGGTAA GAGAAAGAGC AGGATTAAAA GGCGTAGCAG AATCATGGTC ACAGTACTCT
ACCAGTCCGA ATAAGTACAA TACCAAAGAT GGATTACGTG CTATTATTCA CCAGGAAAGA
AGAATTGAAA CCGCGTTCGA AGGCCAGGCA GGATGGGATT TACGCAGATG GAAAGAATTG
CAGAATGTAC TGAGTACGCC GTTGCAGGGC TGGAATGTGT TCAACAGAAC AACGGAAGGT
TACTATCAGC TGAGAATTGC ACAACAGACT GTTTTCGGTG TAAGGAACTA CCTCTATCCT
ATTCAGGACT ACGATCTGCT CACGAATCCG AACCTGGTAC AGACCCTTTA CTGGTAA
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| Protein sequence | MQTIIKIFIS TALSISLLSS CNKYLDVVPD DVATLESAFA NANETQAYLF GCYATMQALT
DIRRNAGFTT SGEVMFPYPL QDQTTLGGGG GDAGFSIMRG IQNSANPLLN YWDGYNMGIN
MWQAIRKCNI FLENVHIPLD LPEFQRKRWA AEAKFLKAYF HYWLIRMYGP IPIVDVNLPV
NASIEDVRIK QQPVDSCFNY VVHLLDEAIV DLPPVIQNLA AEQGRISSTI AKAVKAEVLA
TAASPLFNGN RDYAAMKRKD GTQLFSQAYD ESKWQLALTA CREAIDAAAA AGANLYQLRL
SGGIVHMSDE TRRMLTIQGA FVDSWNPEQI WTLNPQFGWQ YMASPRVTAD AAANVFAVYS
NFSVPIGQSE LFYSKNGVPI SEDRTFDYKN RYKLQAGDDS HAYYIKKGYT TVKGNFNREP
RYYADVAFDG SVWFGSGNLD DNNPNYVNAV NGFAAPPDQL RYNATGYWAK KLVPYQTTFG
QTSVQQNYSW PFMRLTGLWL LYAECQNEVN GPGGDALLWI DRVRERAGLK GVAESWSQYS
TSPNKYNTKD GLRAIIHQER RIETAFEGQA GWDLRRWKEL QNVLSTPLQG WNVFNRTTEG
YYQLRIAQQT VFGVRNYLYP IQDYDLLTNP NLVQTLYW
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