Gene Cpin_6768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6768 
Symbol 
ID8362960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8479511 
End bp8480356 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content46% 
IMG OID644968901 
Producturate oxidase 
Protein accessionYP_003126370 
Protein GI256425717 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3648] Uricase (urate oxidase) 
TIGRFAM ID[TIGR03383] urate oxidase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA GACTCGGAGA AAACTGCTAT GGAAAAAACG CGGTGCAATT GTCCAAGATT 
ATACGTCGTC CCGCTTATCA TGAATTCAGA CAAATATCAG TGAACGTATC GCTGAAAGGC
GATTTTGAGG AGGCGCATAC TCTGGGTGAT AATGCGAAGA TATTACCAAC GGATACACAA
AAGAATACCG TGTATGCCCT TGCGAGGGAT CATTTCAAAA CATCCATTGA AGACTTTGCC
CTGCACCTGG TGCATCACTT TGTTACCACA CAGCCACAGG TCAGCGAAGC AACTGTTGAA
ATAGCAGAAC ATGCCTATCA TCGCCTCTTA CTGGATGGCG CTGAACATCC CCATGCCTAT
ATCAGCGGCG GGCAGGAAAA ACATACCACG CTGGTCAGGA AGGATGCTGA AAGTATCAGC
GTCAGTTCAG GTATCAGTGA TCTGCTGATC CTGAAGACCA CAGACTCTGC TTTTGAAAAA
TATATCAAAG ACCAGTATAC GACCCTGAAA GAAACCAGTG ACCGGATACT GGCTACCAAA
TGTACGGTGA GCTGGATGTA TGATAAATTG CCTGCTGACT ACAGCCAGCA GTTCGATAGT
ATCCGGGAGT TGTTGCTGCG CACATTTGCC GGACATAAAA GCTTATCTGT GCAGCAGACC
CTGTTTGCCA TGGGACGTGC TGTACTGGAA GCACATGCCG GCGTGAAGGA GATCTCTCTT
GAGATGCCTA ATAAACATCA TATTCCTTTC AACCTGGAAC AATTTAATAT CCCGCATGAA
AATGAAATTT TTATTGCGAC GGATGAGCCT TATGGTCTGA TTTCGGCAAC GGTGCTGCGG
GATTAG
 
Protein sequence
MKIRLGENCY GKNAVQLSKI IRRPAYHEFR QISVNVSLKG DFEEAHTLGD NAKILPTDTQ 
KNTVYALARD HFKTSIEDFA LHLVHHFVTT QPQVSEATVE IAEHAYHRLL LDGAEHPHAY
ISGGQEKHTT LVRKDAESIS VSSGISDLLI LKTTDSAFEK YIKDQYTTLK ETSDRILATK
CTVSWMYDKL PADYSQQFDS IRELLLRTFA GHKSLSVQQT LFAMGRAVLE AHAGVKEISL
EMPNKHHIPF NLEQFNIPHE NEIFIATDEP YGLISATVLR D