| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6768 |
|---|
| Symbol | |
|---|
| ID | 8362960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 8479511 |
|---|
| End bp | 8480356 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644968901 |
|---|
| Product | urate oxidase |
|---|
| Protein accession | YP_003126370 |
|---|
| Protein GI | 256425717 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3648] Uricase (urate oxidase) |
|---|
| TIGRFAM ID | [TIGR03383] urate oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCA GACTCGGAGA AAACTGCTAT GGAAAAAACG CGGTGCAATT GTCCAAGATT
ATACGTCGTC CCGCTTATCA TGAATTCAGA CAAATATCAG TGAACGTATC GCTGAAAGGC
GATTTTGAGG AGGCGCATAC TCTGGGTGAT AATGCGAAGA TATTACCAAC GGATACACAA
AAGAATACCG TGTATGCCCT TGCGAGGGAT CATTTCAAAA CATCCATTGA AGACTTTGCC
CTGCACCTGG TGCATCACTT TGTTACCACA CAGCCACAGG TCAGCGAAGC AACTGTTGAA
ATAGCAGAAC ATGCCTATCA TCGCCTCTTA CTGGATGGCG CTGAACATCC CCATGCCTAT
ATCAGCGGCG GGCAGGAAAA ACATACCACG CTGGTCAGGA AGGATGCTGA AAGTATCAGC
GTCAGTTCAG GTATCAGTGA TCTGCTGATC CTGAAGACCA CAGACTCTGC TTTTGAAAAA
TATATCAAAG ACCAGTATAC GACCCTGAAA GAAACCAGTG ACCGGATACT GGCTACCAAA
TGTACGGTGA GCTGGATGTA TGATAAATTG CCTGCTGACT ACAGCCAGCA GTTCGATAGT
ATCCGGGAGT TGTTGCTGCG CACATTTGCC GGACATAAAA GCTTATCTGT GCAGCAGACC
CTGTTTGCCA TGGGACGTGC TGTACTGGAA GCACATGCCG GCGTGAAGGA GATCTCTCTT
GAGATGCCTA ATAAACATCA TATTCCTTTC AACCTGGAAC AATTTAATAT CCCGCATGAA
AATGAAATTT TTATTGCGAC GGATGAGCCT TATGGTCTGA TTTCGGCAAC GGTGCTGCGG
GATTAG
|
|---|
| Protein sequence | MKIRLGENCY GKNAVQLSKI IRRPAYHEFR QISVNVSLKG DFEEAHTLGD NAKILPTDTQ
KNTVYALARD HFKTSIEDFA LHLVHHFVTT QPQVSEATVE IAEHAYHRLL LDGAEHPHAY
ISGGQEKHTT LVRKDAESIS VSSGISDLLI LKTTDSAFEK YIKDQYTTLK ETSDRILATK
CTVSWMYDKL PADYSQQFDS IRELLLRTFA GHKSLSVQQT LFAMGRAVLE AHAGVKEISL
EMPNKHHIPF NLEQFNIPHE NEIFIATDEP YGLISATVLR D
|
|---|
| |