| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6746 |
|---|
| Symbol | |
|---|
| ID | 8362938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 8454362 |
|---|
| End bp | 8455651 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644968879 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003126348 |
|---|
| Protein GI | 256425695 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATACAGC TTACCAGCTT TCATAAAAGT ACAGTGATCA TCCTGTTGTG TTTTGTCATA
ATGCAATACG GGAAGGCGCA GACATTGACG CCCTGGAATA AGGGAAATCT TGATATTCAT
TTTATTAATA CCGGTAGAGG AGATTGTGCA TTTATGATCA TGCCGGACGG TACGACTATG
CTGATTGACG CAGGAGAACT GAATCCTGTG GATGCACGAA CGAGATCGGC GCGTACAGTT
CCTTTACAGC CGGATACCAG TCAGCAGGCT TATGCCTGGA TAGCAGATTA TATTAAGGCT
GTCAATCCAT ATGCCTGGAT AGATTACGCA ATGATCACGC ATTTTCATGA TGATCATTTT
GGTGGAATGT ATAAGACAGC ACCGGCTGCG GCTTCAGGCA AATATTATTT AACAGGTATC
ACTGGCGTGG GAGACAGGAT TCCCATCCGG AAGTTAGTAG ATCGTGGTTA TCCGGATTAT
AATTATCCGA TTGATCTCAG AAAGGAGATT GCCAAAGATG TGCAACAGGA AGATGCGGAG
TTGCAGCAAA TGGCGAATTA TATCCATTTC ATTGACTACC AGGTTGCAAC GCAGGGAATG
AAAGCAGAGC GGTTTAAGAC AGGCAGTAAA GAACAATTTG TGTTGATAAA AGATGCGAAA
GCATATCCTG CTTTTCATAT CCGGAATATT ATGTCAAATG GATTTGTCTG GAATGGAGCA
GGAGAAGGTG TCTATAATCA TTTCGCTAAT ACAGGCGGTG TATTGCCCGA TGAGAATAAT
GGGGGTTGTG GCGTGCGTGT ACAATATGGT CAGTTCAGTA TGTTCTTTGC GGCGGACATC
CAGGGGATTG TAAACTATGG TGAGCCCGCC TGTGCTGATA TGGAAAGTGC CGTCGCACCT
GCTGTGGGGC GTGTAGACAT TGCAACGATC AGTCATCACG GTAACAGGAA TGCGCTGAAC
GTCAACTATA TACAAACCCT GCGTCCAAGG GTGTGGATAG AGCAGGTCTG GTCAAGCGAT
CATCCAGGAC ATGAGGTATT GAACCGGCTT ACGTCCCGGG CGACGAACCC ATATCCACAT
GATCTCTTTG CGACTAACAT GCTGGAAGCA AATAAGCTGG TGATCGGACC GGCGCTGGAG
AATGCGTATA AGAGTACATC AGGACATATT GTGATCCGGG TGGCCCCGGA TGGTGGCAGT
TACCGCATTT TTGTGCTGGA TTCATTTAAA AAGGGGCAGC AGGTGAAGCA GGAGTTTGGT
CCGTATACAG CAGGTAGTAA TCAGCAATAG
|
|---|
| Protein sequence | MIQLTSFHKS TVIILLCFVI MQYGKAQTLT PWNKGNLDIH FINTGRGDCA FMIMPDGTTM
LIDAGELNPV DARTRSARTV PLQPDTSQQA YAWIADYIKA VNPYAWIDYA MITHFHDDHF
GGMYKTAPAA ASGKYYLTGI TGVGDRIPIR KLVDRGYPDY NYPIDLRKEI AKDVQQEDAE
LQQMANYIHF IDYQVATQGM KAERFKTGSK EQFVLIKDAK AYPAFHIRNI MSNGFVWNGA
GEGVYNHFAN TGGVLPDENN GGCGVRVQYG QFSMFFAADI QGIVNYGEPA CADMESAVAP
AVGRVDIATI SHHGNRNALN VNYIQTLRPR VWIEQVWSSD HPGHEVLNRL TSRATNPYPH
DLFATNMLEA NKLVIGPALE NAYKSTSGHI VIRVAPDGGS YRIFVLDSFK KGQQVKQEFG
PYTAGSNQQ
|
|---|
| |