Gene Cpin_6726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6726 
Symbol 
ID8362917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8419692 
End bp8421017 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content47% 
IMG OID644968858 
Producthypothetical protein 
Protein accessionYP_003126328 
Protein GI256425675 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0771902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.314379 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT GGATGATCAT CCTGCTGCTG CTTTGTCAGA CAGGTTATGC CCAACAACAC 
AAGAATACGT TTACCGATTA TATACAACCA GCGGTGTTTT CATTGTCAAT GGTGATGATG
CATGACGTGG TGAATCCACC TGCCGCCTGT CGTTTTTATA GTTATGCGAT GATGTCGGCC
TATAGTATTG TGGCGGCCCA TAATAAAGAG ATTCCTGATG CAAAGCGCTT TATTGCTTCC
TATCCCGGTA TTGCAGTACA TGACAGCGGC AGGGTGTACG ACTATCGTAT TGCAGCTGTA
TATAGTATTC TGGAGACCGG CAAACTGATG CTGCCATCGG GTTTTATGCT GGAGAAGGAT
GAGGAGAAGC TGGTATTATT GTTTAAAAAA GACAAAACGC CGGACAGTAT CATCCGTAAT
TCCATTGCGG TAGCGGTAGA TGTGGCGAAA CAATCCGTGC AGTGGGCGCG GCCGGATGGG
TATACAAAAC TGAGTACGAG GGTGCGTTAT ACGCCGGCAA AAGGGGAGGG TTACTGGTAT
CCGACACCCC CCGCTTATAT TGAAGCCGTG GAGCCTCACT GGAAAACGAT CCGTCCGATG
GTGATTGATT CCTGTAACCA GTTTCTGCCT TTGCCTCCGG TACCTTTCAG TAAGGATACA
GGTAGTGCTT TTTACGCATT GAATAAGGAG GTGCATGATG CAGGAGTGAG TCTGAATATG
GGACAAAGGG CAATCGCGTC GTTCTGGGAT TGTAATCCGT TTGCCGTAAG TACTTATGGA
CATATGGCTA TAGGCTTTAA GAAGATCACC CCCGGTGGTC ACTGGATGAA TATTACCGGC
ATTGCTGCCC GGAAAGTACA GCTGGATTTT GATAAGACGG TGTTAGTACA TACGTTAGCA
GCTGTAACGA TGATGGATGC TTTTATCAGT TGCTGGGATT CCAAATACAC CAGCAACCGT
ATCCGCCCGG AAACCTATAT CAACAAGTAT ATGGATGTGC GCTGGAAACC GTTGTTACAA
ACCCCGCCTT TTCCGGAGTA TACCAGCGGG CATAGTGTTG TGTCTTCTGC GGTGGCAACG
GTGCTGACTT ACATGATGGG AGATCATTTT GAATATGAAG ACAATACCGA GGAGATGTTT
GAAATCCCCA CCCGCAAATT CAGTTCTTTC CAGGCTGCCT GTAATGAAGC GGCTATTTCC
CGTTTATATG GCGGTATTCA CTTCCGCGAT GCGATCGAGA ATGGTGTTGT TCAGGGGCAT
AAGGTAGGAG AAAAGGTAGT GGAAAGGATC AGGGATGCGG GTATTAAGCC TGTATATGGC
CGCTAA
 
Protein sequence
MKKWMIILLL LCQTGYAQQH KNTFTDYIQP AVFSLSMVMM HDVVNPPAAC RFYSYAMMSA 
YSIVAAHNKE IPDAKRFIAS YPGIAVHDSG RVYDYRIAAV YSILETGKLM LPSGFMLEKD
EEKLVLLFKK DKTPDSIIRN SIAVAVDVAK QSVQWARPDG YTKLSTRVRY TPAKGEGYWY
PTPPAYIEAV EPHWKTIRPM VIDSCNQFLP LPPVPFSKDT GSAFYALNKE VHDAGVSLNM
GQRAIASFWD CNPFAVSTYG HMAIGFKKIT PGGHWMNITG IAARKVQLDF DKTVLVHTLA
AVTMMDAFIS CWDSKYTSNR IRPETYINKY MDVRWKPLLQ TPPFPEYTSG HSVVSSAVAT
VLTYMMGDHF EYEDNTEEMF EIPTRKFSSF QAACNEAAIS RLYGGIHFRD AIENGVVQGH
KVGEKVVERI RDAGIKPVYG R