| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6719 |
|---|
| Symbol | |
|---|
| ID | 8362910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 8413871 |
|---|
| End bp | 8414953 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644968851 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003126321 |
|---|
| Protein GI | 256425668 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.759063 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTC TAGGAGGAAT TGCTTTAGCA CTTGGCATCT GTCTGATGCA CGACGGAATA
CCTGACAACC TGAAAATGAA CAGGATACAG GTAATCGGAT CTCACAATAG CTATAAAAGA
GCCATAGACC CGGCCTTATT TAAAGTATTC CAGCAAAAAG ACTCCGTATC AGCCAGCAAA
CTGGACTATG AACACATTTC CATTGCAGAA CAACTGGATA TGGGCTTATT AAACCTGGAA
ATTGATGTTT ATCCGGATGA AAAAGGCGGA CGTTTCGCGC ATCCGAAAGG ATTGCAATGG
GCGCCTGGAC AAGCTCCATT TGATGAAAAA GGCGTTATGA ACGAACCGGG TTTCAAAGTA
CTGCATGTAC CGGATCTGGA CTTCCGCAAT GACTACCTGA CCTTAAAGAA TATCCTGGCC
GAATTGAAAA CCTGGTCAGA TAAACATCCT GATCATTACC CGATCTTTAT CACCCTGGAA
CCTAAGGACG GTACCTCTAA TGAGAAAAAC ACAACCGCTC CGGAGCCATT CACGCCAAAA
ACGTATGAAG AACTGGATAA GGCGTTGATA GCAGGATTGG GTAAAGAACA CATCATTACA
CCGGATATGG TCAGAGGTAA ATATAAGACC CTGGAAGACG CTGTATTGCA TGACAACTGG
CCTACCCTGA AAGATGCCAA AGGTAAATTT GCCTTCCTGC TGGATGCCAA TGGCCCTAAA
AAAGACATGT ATGTAGCCGG TCATGCTTCC CTGAAAGGCA GGGTAATGTT TGCCAATGCG
GATCCGGGAC AGCCTGAAGC AGCAATGCTT TTCAGAAACA CACCTACGAC ACCGGAAATC
AAAGACCTGG TAGCAAAAGG GTATATCATC CGTACCAGGG CAGATGCGGA TACCCGGGAG
GCGCGTCTGA ACGATAAATC CAATTTCATG GCCGCCTGTA ATTCCGGCGC ACAGATCATT
ACTACCGACT ATTATAAGAA AAGCACACAC TTCGTTTCTG ACTATGAGAT CAGTTTCGAT
GATAAAAAAT ATGTAAGGCT CAATCCCGTA CTGAATGGTA TAGCAGCAGG TGGCAGTAAA
TAA
|
|---|
| Protein sequence | MKILGGIALA LGICLMHDGI PDNLKMNRIQ VIGSHNSYKR AIDPALFKVF QQKDSVSASK
LDYEHISIAE QLDMGLLNLE IDVYPDEKGG RFAHPKGLQW APGQAPFDEK GVMNEPGFKV
LHVPDLDFRN DYLTLKNILA ELKTWSDKHP DHYPIFITLE PKDGTSNEKN TTAPEPFTPK
TYEELDKALI AGLGKEHIIT PDMVRGKYKT LEDAVLHDNW PTLKDAKGKF AFLLDANGPK
KDMYVAGHAS LKGRVMFANA DPGQPEAAML FRNTPTTPEI KDLVAKGYII RTRADADTRE
ARLNDKSNFM AACNSGAQII TTDYYKKSTH FVSDYEISFD DKKYVRLNPV LNGIAAGGSK
|
|---|
| |