Gene Cpin_6674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6674 
Symbol 
ID8362865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8369378 
End bp8370226 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content41% 
IMG OID644968808 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_003126278 
Protein GI256425625 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGT ATCTACCAAT ATTACTTGCC ATATTTCTAC TGTCTTCATT CAGGGAGAAA 
GAATTAACCT GGGTAGCTAT CGGCGATTCC ATCACCTATC TGAATGATCA TCTGGATGAA
ACGGGTAACA GGGTGTCTAA AGGATATTTA ACCCGCCTGA ATGAGATATT GCCCAATCTT
AAATATATCA ATCAGGGACA TAACGGATGG ACATCAGGTG GAATCGCAGG TAACATTGAT
AGTCTTGGTC TGATCAAAGC AGATGTATAT TCTGTTTTTC TTGGCACCAA CGACTGGTGG
CAGGGCAGAC CGGTAGGAAA GTTGGATGAC TATCAGCATG ACAATGGGAA TACAACAGTT
TATGGCTCCT TCCGGATCAT TATCAGTAAG ATCCGCCAAC TGAATCCCGA GGCCAAGATT
GTATTGATCA CACCTATGCA GCGTAACGAT TTTGTGTATA TCGCAGATGC TAAAAATAAT
GCTTTCGGTT CCTACCAGAA GAAAAATGGG CAAACACTGG AAGAATTTGC AAATGCGGTT
TTAACTATCG GACGCTATGA ACAGATTCCG GTCGTCGACC TATATCATCA TCCGCTGCTT
ACACTGAGAA ACATGGTAAA GTTCAAACAT CTGAAGAATC CCAAAAACGG TAAATATGTC
AATTATAAAT ACCCGGCATT TGTAAACATA CCCTTCAATC CTGAAAATAA TGAATATCCC
TATCCACCAG CAGCGGTAAA CCTTACTTAC GACGGATTAC ATCCATCAGA TAAAGGAAAT
GCTATCATCG CCTCCGCGCT TGCGGATGTA TTCAGGCAAC TTGGTTTGTC TCCTCATTAT
GGTCTTTGA
 
Protein sequence
MKKYLPILLA IFLLSSFREK ELTWVAIGDS ITYLNDHLDE TGNRVSKGYL TRLNEILPNL 
KYINQGHNGW TSGGIAGNID SLGLIKADVY SVFLGTNDWW QGRPVGKLDD YQHDNGNTTV
YGSFRIIISK IRQLNPEAKI VLITPMQRND FVYIADAKNN AFGSYQKKNG QTLEEFANAV
LTIGRYEQIP VVDLYHHPLL TLRNMVKFKH LKNPKNGKYV NYKYPAFVNI PFNPENNEYP
YPPAAVNLTY DGLHPSDKGN AIIASALADV FRQLGLSPHY GL