Gene Cpin_6604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6604 
Symbol 
ID8362792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8280376 
End bp8280996 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content49% 
IMG OID644968736 
Producthypothetical protein 
Protein accessionYP_003126209 
Protein GI256425556 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.223767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCAGG AGGCTCCTTT ACATGCATTA GCTGCATATC TGCCTGAAGG AACCTTCGAG 
CAGGTGATGG CCTACCTTAA CCAGTACAAG GTCCACTTAA CGGTGACACG TGAACGGCAA
AGCATCCTGG GCGATTATCG CCATCCCGAC AGAAGGGGTG GTCATCGAAT CAGTATTAAC
GGTAATCTGA ACCGGTATGC TTTTCTGATC ACGTTGCTGC ACGAAATTTC ACACCTTACC
ACATTTATGC AATACGCCAA CAGCGTCGCA TCTCATGGGA AGGAATGGAA GCAGCATTTC
TCCAATATTT TAAAGGAATT TGTCGGTAAG GATTATCTGC CGGCCGATGT GGAAGCTGCC
CTCCGGCAGA GTATCCGTAA TCCGGCTGCC AGTTCCTGCG CAGATGATGA CCTGATGCGG
GTGCTTAAAC GCTACGACCG TCAGAAGGAA AATCATTTCC TGGTAGAGCA GTTACAGCCA
AACCAGTTAT TCCGTACAAA AGACGGCCGC GTTTTCCGGA AAGGGGAGCG TATCCGTAAG
CGTTATCGCT GTGAAGAAGT GGCGACTAAA AGAATGTATC TCTTCAGTCC AGTATATGAA
GTGGAACTGG TAGCTGCATA A
 
Protein sequence
MKQEAPLHAL AAYLPEGTFE QVMAYLNQYK VHLTVTRERQ SILGDYRHPD RRGGHRISIN 
GNLNRYAFLI TLLHEISHLT TFMQYANSVA SHGKEWKQHF SNILKEFVGK DYLPADVEAA
LRQSIRNPAA SSCADDDLMR VLKRYDRQKE NHFLVEQLQP NQLFRTKDGR VFRKGERIRK
RYRCEEVATK RMYLFSPVYE VELVAA