| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6603 |
|---|
| Symbol | |
|---|
| ID | 8362791 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 8279305 |
|---|
| End bp | 8280321 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644968735 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003126208 |
|---|
| Protein GI | 256425555 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.175733 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCT TCCGCGACTT TTTCCTGTTT TGTTCAGGAG TGCATGTGCC TATGCTGAAA
AGAGCCCCGT CAGAAACAAA CAAATATGGC GGTATCGGGG CGACCATCTT TTTCACCGGA
CTACTGGCTG CTTTTTCCGG TGGGTATGCG CTATGGACAG TCTTCAGTTC CCCTTGGGGC
GCTGTTGTAT TCGGCATCGT ATGGGGACTG ATGATCTTTA ACCTGGACAG GTATATCGTT
TCAGGTATGA AAAAGCGTAG CCGTTTTATG CAGGAATTTG GTATGGCCCT CCCCAGGCTG
GTACTGGCCA TCCTCATTGC CGTGGTGATC TCCAAACCAC TGGAATTGAA AGTATTCGAA
AAAGAGATCA ACCAGGAGCT GATCGTCATG GAGCAACAGG TGTTCAAAAC CCAGGAAGAC
AAGGTGAAAG ACCGCTTCCA GCAACAGGTC AACACACTGA ATGCAGAAAT TGCCCAGCTC
AATGAAGGCA TCCGTCAGCA GGCGATCAAG GTAGACACCC TGCAGCTTAT TGCCCAGCAG
GAAGCGGATG GTACAGGTGG TTCCCGTAAA CAAAACCTCG GTCCCATCTA CAAAGCAAAA
AAAGCGGATG CTGATAGTGC AGCCGCTTTA CTGCAAAGAG TCACCACGCA GAATGGCGCC
CTGATCGCAC AGAAGCGGCA GCAACTGGCG AGTATTGATT CTACCCGTCA GTCAACTGTC
GGTACGCTGG ACCGTAGTCA CATTGATGGT CTGGCTTCCA GACTGGATGC ACTGGGACAC
CTCACTGACC GTAGTGAACC TGTGAAATGG GCCAATTGGT TCATCATGCT GCTGTTTATC
ACGATTGAAA CAGCGCCGGT ATTCGTAAAA CTGATTTCTC CCCGCGGACC TTACGACGAT
CTGCTGGAAG CACACGAACA TGCTTATATC ATTTTCCGCA AGGAGACGAT AGAGAAAAGT
GAACGTGCAT ACAATAAGCG TATGATGATC GGGCAAACAG CGGGTGTAAA TTCTTAA
|
|---|
| Protein sequence | MKRFRDFFLF CSGVHVPMLK RAPSETNKYG GIGATIFFTG LLAAFSGGYA LWTVFSSPWG
AVVFGIVWGL MIFNLDRYIV SGMKKRSRFM QEFGMALPRL VLAILIAVVI SKPLELKVFE
KEINQELIVM EQQVFKTQED KVKDRFQQQV NTLNAEIAQL NEGIRQQAIK VDTLQLIAQQ
EADGTGGSRK QNLGPIYKAK KADADSAAAL LQRVTTQNGA LIAQKRQQLA SIDSTRQSTV
GTLDRSHIDG LASRLDALGH LTDRSEPVKW ANWFIMLLFI TIETAPVFVK LISPRGPYDD
LLEAHEHAYI IFRKETIEKS ERAYNKRMMI GQTAGVNS
|
|---|
| |