Gene Cpin_6571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6571 
Symbol 
ID8362756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8243380 
End bp8243814 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content47% 
IMG OID644968700 
Producthypothetical protein 
Protein accessionYP_003126176 
Protein GI256425523 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTTG CTACTGCTAT ATCCATTGCT ACCGAAGCCC ATGCCGGCCA GCTCGACAAA 
TACGGCGCTC CCTACATCGC ACACGTCATG CGTGTAATGC AACTCGGTAA AACAGATGAT
GAAAGGATCG TCGGCGTACT GCACGACGTA GTGGAAGATA CTTCCTGGAC CTTCGGACAA
CTGATCGAAA AAGGACTCGC CCCACATCTC GTTGAGGCAT TACGGTGTGT CACCAAACTC
TCCGATGATG AAGACTATGA TCACTTCATC AACCGCATCA TCCCCAATCG CCTGGCCTGC
CTGGTCAAGC TCAATGATCT TACTGATAAC ATGGACATCA GAAGAGTAAC CGAACTAACT
GAAAAAGATG TACCGCGCTT TAATAAGTAC CTCAAAGCTT ACAATAAAAT TGCAGCGGTC
ATTTCCCGTA ATTAA
 
Protein sequence
MTLATAISIA TEAHAGQLDK YGAPYIAHVM RVMQLGKTDD ERIVGVLHDV VEDTSWTFGQ 
LIEKGLAPHL VEALRCVTKL SDDEDYDHFI NRIIPNRLAC LVKLNDLTDN MDIRRVTELT
EKDVPRFNKY LKAYNKIAAV ISRN