| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6565 |
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| Symbol | |
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| ID | 8362750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8233348 |
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| End bp | 8234814 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968694 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003126170 |
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| Protein GI | 256425517 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0333955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAGA AATTATTATA TATACTCATA GCTGTACCGG TATTAATTTT CAGTTCCTGC
AGCAAAGATT ATCTGGATAC GAACCCTACT GATGCCTATC CTTCCGGCGC AGTATTCAGC
AATATAGCAG GCGCATGGTC GGCTATCAAT GGTATTCACC GTTCCCTGTA TATCCAGTAT
GATAACCAGG ACCAGGGTGG TCAGGGTAGT ATCATGCTCA ACAATGATAT GCTGGGTGAT
GACCTGGTAA TGACAGCAGC CGGTAACGGT TGGTTCAACT CACAGTATCA GTGGGTGACA
CACCGTACGA CTTCTGCGAC TTTCCTGAAA TACACTTACT ATTTCTACTA CAAGATCATT
GCAAACGCAA ACATGATCAT CGACAATATC GACGCAGTAG ATGCTGACCC GGCGGAGAAA
GCTATCATTA AAGGACAGGC ATTCGCTTAC CGTGCATGGT CTTACTGGAA CCTGGTGCAG
ATGTATGGCA AACGCTTTGA CGCAAACGGT AATAACAGTC AGCTGGGCAT ACCGCTGGTA
CTGACCAATA CGGTTGAGCC ACTGCCAAGA TCTACAGTTG CACAGGTATA TACACAGATC
AACAAAGATA TTGATGCAGC TTTGACAGGT CTGGCCGGTT ATGCAGGCGA TAACAGATCA
CACATCAGCG AAGCGGTAGC AAAAGGCTTT AAAGCACGTA TTGCTTTGAC ACAGCAGGAC
TGGGCGACAG CAGCACAATT TGCTGCAGAA GCGAGAGCTG GTGTAGCACT GATGTCTAAT
GCAGATTATT TGAAAGGTTT CAATGATTAT AACAATGCGG AGTGGATGTG GGGTAGTCAC
CAGATCTCTG AGCAGACCAC TTATTTCTAT TCCTTCTTTG CGTTCATCTC TGCAAACTTC
AACTCCAGCG CTATCAGAAC GAATCCTAAA GCGATCAACA GCACGCTTTA CGAAACCATG
TCAGCTACAG ATGTACGCAG ACTGGTATTC AGTCCGGATG GTAAGAACGT GCCTGTTCCA
TCAGGTGGTA TCAGTCCGGC TTATATCAAC AAGAAGTTCC TGACCGCTAC CAGCAGCAGC
ATTGGCGACG TACCGATGAT GCGTGCAGCG GAGATGTACC TGATCGAAGC GGAAGCTAAA
GCACGCCTGA ATGACAATGC TGGCGCAGCT GATGCACTGT ATACACTGAT GGTGAATCGT
GACCCAAACT ATACAAAAAG CACTAACACA GGCGATGCAC TGTTGCAGGA GATCCTGAGA
CACCGTCGTA TTGAACTGTG GGGCGAAGGG TTCCGTTTCT ATGACCTGAA ACGTATGAAC
CAGGCACTTG ACAGGACCGG CAGCAACCAT ACGACTACTT TGACGAATGG TCTGATGCAG
GTACCGGCAG GAGATATTCG TTGGGAATTC CTGTTCCCGC AGGATGAGAT CAATGCGAAT
GGTAACATTA TTCAGAACGA TCTGTAA
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| Protein sequence | MTKKLLYILI AVPVLIFSSC SKDYLDTNPT DAYPSGAVFS NIAGAWSAIN GIHRSLYIQY
DNQDQGGQGS IMLNNDMLGD DLVMTAAGNG WFNSQYQWVT HRTTSATFLK YTYYFYYKII
ANANMIIDNI DAVDADPAEK AIIKGQAFAY RAWSYWNLVQ MYGKRFDANG NNSQLGIPLV
LTNTVEPLPR STVAQVYTQI NKDIDAALTG LAGYAGDNRS HISEAVAKGF KARIALTQQD
WATAAQFAAE ARAGVALMSN ADYLKGFNDY NNAEWMWGSH QISEQTTYFY SFFAFISANF
NSSAIRTNPK AINSTLYETM SATDVRRLVF SPDGKNVPVP SGGISPAYIN KKFLTATSSS
IGDVPMMRAA EMYLIEAEAK ARLNDNAGAA DALYTLMVNR DPNYTKSTNT GDALLQEILR
HRRIELWGEG FRFYDLKRMN QALDRTGSNH TTTLTNGLMQ VPAGDIRWEF LFPQDEINAN
GNIIQNDL
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