| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6561 |
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| Symbol | |
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| ID | 8362746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8228789 |
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| End bp | 8230459 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644968690 |
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| Product | putative transmembrane transporter |
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| Protein accession | YP_003126166 |
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| Protein GI | 256425513 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCAAC AAACAAAGCA AAGTACACAT CCATCTTTCT TTGTACTGAT ACTTGTATTT
TTTTTCTGGG GCTTCGTGGC TGCTTCAAAC AGCATCTTCA TCCCCTTTTG TAAAGCGCAT
TTCCACCTTG GACAACTGGA ATCTCAATTA ATTGATTTCT CTTTCTACGG CGCTTACTTT
ATCGGCTCGC TGTTGCTGTA TCTCTTCTCA GCACTACGAG GCGTAGATAT CTTAAACAAG
ATCGGTTACC AGAAAGGTAT CATTTACGGC CTGCTCATAT CAGTAGTAGG TGCAATCGCG
TTAATCGCCG CAGTGAACAT CGGTAACAAA ATGGCTGATT CCACTGCCGC GTTCTATCTT
ATTCTGGGTG CTTTCTTTAT CGTTGCGCTG GGCTTTTCTC TGCAGCAGAC TGCAGCTAAC
CCCTTTGCCA TTTTATTAGG CGATCCGGCT AAAGGTACTC ACCGTCTTAA CCTGGCGGGA
GGTATCAACT CCTTTGGTAC CACTATCGGA CCACTGGTAG TAAGTATTCT TCTTTTTGGT
TCTGCGAAAG ATGCTTCCGT GTCTGCTGAC ACTGACATCA GCAAGATCAA TACGCTCTAC
GTCCTGTTGA TCGTACTATT CCTTGTTGCC GCAGCTATCT TCTGGTTCTC CAAAATGCCT
AAAGGCACAT CTGACGAACC ATTTGAGCAA TCTCCGCGTG CAAGTAAATC CCTGAGCGCT
ATCACCGGCA TGTTCGTCCT GATCATGGTT GGTCTCGTAC TCAATGCGAT CAAAACTTCT
ATCGGCGTTG CTGAAACAAC TGACCTGGGC CTGCCTTTCT TCCTGATCGG TATCGTAGGT
ATCCTCGCAA TTCTCTTCTA TTCCCTGAAC AGCGCACGCA AGGATGGTAA TGGCTGGGGA
GCCATGAGAT ATCCGCAGCT CATTATGGGT ATGATCGCCA TCTTCGTGTA CGTTGGTGTG
GAAGTAACCA TCGCCAGCAA CATGGGCGCC CTGCTGAAAC ATCCGGGCTT CCTTACACTG
GAAGGTTTAT CAGAATCCCA GATCGACCCT TATGTATCCC TCTTCTGGGG TAGTATGATG
GTGGGGCGCT GGACAGGTGC TATCACCGTA TTCAATGTAT CCAAAACCGG TCGTCAGATC
CTTTCTGTGA TCGTTCCGTT CATTGCTTAT GGCGTAGTAC TGACAGCAAA TCACCTGAAA
GGTACAGATG TAAGTGTGCT GTATCCTTAT GCAGGTGTAC TGGTCGTTCA GATCATCGGC
TTCTTCGCCG GTCAGGACAA ACCGGCAAAG ACCCTCATGA TCTTCGCACT GCTTGGTATC
ATGGCCATGG TGATAGGTCT CTTCACTACC GGTGAAGTAG CGATCTTCTC CTTCGTTGCG
GGCGGTCTGT TCTGCTCCGT AATGTGGTCA TGCATCTTCG CACTGTCGAT CGCTGGTCTG
GGCAAATACA CCAGCCAGGG TTCTTCCTTC CTGGTACTGA TGATCCTCGG TGGTTCACTC
GTTCCTCCGG TTCAGGGTGG TCTCGCAGAT ATCCCTTCTA TCGGTATCCA TTATTCTTAC
ATTATTCCGG TTGTATGCTT TGCATACCTG GCATTCTTTG CATTCAGAGT TAAAAACATA
TTAAAATCAC AGGGAATAGA TTATGAGTCA GCAATTAGCG GTGGGCATTG A
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| Protein sequence | MAQQTKQSTH PSFFVLILVF FFWGFVAASN SIFIPFCKAH FHLGQLESQL IDFSFYGAYF
IGSLLLYLFS ALRGVDILNK IGYQKGIIYG LLISVVGAIA LIAAVNIGNK MADSTAAFYL
ILGAFFIVAL GFSLQQTAAN PFAILLGDPA KGTHRLNLAG GINSFGTTIG PLVVSILLFG
SAKDASVSAD TDISKINTLY VLLIVLFLVA AAIFWFSKMP KGTSDEPFEQ SPRASKSLSA
ITGMFVLIMV GLVLNAIKTS IGVAETTDLG LPFFLIGIVG ILAILFYSLN SARKDGNGWG
AMRYPQLIMG MIAIFVYVGV EVTIASNMGA LLKHPGFLTL EGLSESQIDP YVSLFWGSMM
VGRWTGAITV FNVSKTGRQI LSVIVPFIAY GVVLTANHLK GTDVSVLYPY AGVLVVQIIG
FFAGQDKPAK TLMIFALLGI MAMVIGLFTT GEVAIFSFVA GGLFCSVMWS CIFALSIAGL
GKYTSQGSSF LVLMILGGSL VPPVQGGLAD IPSIGIHYSY IIPVVCFAYL AFFAFRVKNI
LKSQGIDYES AISGGH
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