| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6543 |
|---|
| Symbol | |
|---|
| ID | 8362727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 8207585 |
|---|
| End bp | 8208454 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644968671 |
|---|
| Product | GTP-binding protein Era |
|---|
| Protein accession | YP_003126148 |
|---|
| Protein GI | 256425495 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1159] GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATAAAG CGGGTTTTGT AAATATCTTC GGTAAGGCCA ATGCAGGGAA AAGTACCCTG
ATGAACGCTC TGGTGGGCGA GAAACTGGCT ATTGTATCTC CGAAGGTCCA GACAACAAGA
CATCGTATTA CGGGTGTGGT GACAACACCG GAATATCAGA TCGTATTCTC TGATACGCCC
GGTATTATTG ATCCCCGTTA TCGTCTGCAC GAAAAAATGA TGGGTGCTGT TAAGTCTGCC
CTGGAAGACG CCGACGTGGC CATGTTAATC ATGGACGTGA AGGATAATCT GGAAGAAAAC
CTCTCTCTGT TTGCATCACT CAAACTAAAA GCCCGCACCA TATTGGTGCT GAATAAGTCA
GATCTGCTGA TGAAGGAAGA GCTGGATGTG CTGGTGAAAA AGTGTGAAGA GTGGGGCAAG
GCAGAAAAAG TAGTGCTGAT ATCAGCGATG CAGGGTAAAG GTGTACCGGC ATTGCTGCAG
ACTATCGTAG GCATGCTCCC CGAAAGCGAG CCTTTCTACC CGGAAGATAC CTTAACAGAT
AAGTCTACAC GCTTCTTCGT AGGCGAAATC GTCCGGGAAA AAATATTCCA GCTCTTTGAC
GAAGAGATCC CTTATCATAC AGCAGTAGCT GTAACACAGT TCCAGGAAAA GAATACGCTG
ATCAAAATTT CAGCGGATAT TATCGTGACG CGTGAAACGC AGAAAGCGAT TATCCTGGGC
GACAAAGGAT CTTCCATTAA AAAGATCGGT ACACTGGCCC GCCAGGATAT TGAGAAATTT
GTGGGTCAGA AAGTGTTCCT TGAACTGTTT GTGAAGGTAA GAGGCAAATG GCGGGATAAT
GATATTTATT TAAAGGAATA CGGTTATTAA
|
|---|
| Protein sequence | MHKAGFVNIF GKANAGKSTL MNALVGEKLA IVSPKVQTTR HRITGVVTTP EYQIVFSDTP
GIIDPRYRLH EKMMGAVKSA LEDADVAMLI MDVKDNLEEN LSLFASLKLK ARTILVLNKS
DLLMKEELDV LVKKCEEWGK AEKVVLISAM QGKGVPALLQ TIVGMLPESE PFYPEDTLTD
KSTRFFVGEI VREKIFQLFD EEIPYHTAVA VTQFQEKNTL IKISADIIVT RETQKAIILG
DKGSSIKKIG TLARQDIEKF VGQKVFLELF VKVRGKWRDN DIYLKEYGY
|
|---|
| |