| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6534 |
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| Symbol | |
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| ID | 8362718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8197879 |
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| End bp | 8198643 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968662 |
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| Product | succinate dehydrogenase/fumarate reductase iron-sulfur subunit |
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| Protein accession | YP_003126139 |
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| Protein GI | 256425486 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0615276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.448752 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACATT ATAACATGAA TCTCACACTT AAAGTGTGGA GACAGAAAAA TACAAACGCA
CAGGGACATT TTGAAAGCTA CCAGGTTCCT GGTGTTTCTT CCGAAATGTC ATTCCTTGAA
ATGTTTGATG TGCTGAATGA GCGTCTGATC AATGAAGGTA AAGAGCCTGT TGCATTCGAC
CACGACTGTC GTGAAGGGAT CTGCGGAGCC TGTTCCATGC ATATCAATGG CCGTGCACAC
GGTCCTTGGG CTGGTACTAC TACCTGTCAG CTGCACATGC GCGCATTCAA AGATGGCGAT
ACCATCACTG TTGAGCCATG GAGAGCCGGT TCTTTCCCTG TAGTGAAAGA CCTGACCGTT
GACAGAGGTG CTTTTGACCG TATCATCGAA GCAGGTGGTT ATGTATCTGT AAATACAGGT
AATGCACAGG ATGCTAATAA TATCCTGGTT CCAAAAGATA AAGCTGACGC AGCATTCGCA
GCAGCAGCAT GTATCGGTTG CGGCGCCTGT GTAGCAGCTT GTAAAAACTC TTCAGCTATG
CTGTTCGTTT CTGCGAAAGT ATCCCAGCTG GCATTACTGC CACAGGGTCA GCCTGAAAAG
AAATCAAGAG CGCTGAACAT GATCGCTCAG ATGGATAAAG AAGGTTTTGG TAGCTGTACC
AACACCGGCG CCTGTGAAGC GGAATGTCCG AAAGAAATTT CCCTGACAAA TATTGCACGT
CTGAACCGCG AGTACATTGC CGCTGGTCTC AGCTATGAAA AATAG
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| Protein sequence | MEHYNMNLTL KVWRQKNTNA QGHFESYQVP GVSSEMSFLE MFDVLNERLI NEGKEPVAFD
HDCREGICGA CSMHINGRAH GPWAGTTTCQ LHMRAFKDGD TITVEPWRAG SFPVVKDLTV
DRGAFDRIIE AGGYVSVNTG NAQDANNILV PKDKADAAFA AAACIGCGAC VAACKNSSAM
LFVSAKVSQL ALLPQGQPEK KSRALNMIAQ MDKEGFGSCT NTGACEAECP KEISLTNIAR
LNREYIAAGL SYEK
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