Gene Cpin_6490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6490 
Symbol 
ID8362674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8152008 
End bp8152322 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content46% 
IMG OID644968618 
Productpyridine nucleotide transhydrogenase subunit alpha 
Protein accessionYP_003126095 
Protein GI256425442 
COG category[C] Energy production and conversion 
COG ID[COG3288] NAD/NADP transhydrogenase alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.994038 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCTG TTTTTTCTTT TTTAGAACAA CATCTTGAGC TGACCTACAT TGTTATTCTT 
TCCATCTTCC TTGGCGTGGA GGTCATCTCC CGCGTACCAT CCGTATTACA TACCCCACTA
ATGAGTGGCG CCAATGCGAT CCACGGCGTT GTGATCATCG GGGCGATTAT CGTAATGGGA
CAGGCCAGCG ATGAAAATTA CCTGGCGCTG ATACTTGGAT TTCTGGCAGT GATACTGGGA
ACGATAAACG TAGTAGGTGG CTTTGTCGTG ACTGACAGAA TGCTTGAGAT GTTCAAATCG
AAAAAGACCA AATAG
 
Protein sequence
MEAVFSFLEQ HLELTYIVIL SIFLGVEVIS RVPSVLHTPL MSGANAIHGV VIIGAIIVMG 
QASDENYLAL ILGFLAVILG TINVVGGFVV TDRMLEMFKS KKTK