| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6459 |
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| Symbol | |
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| ID | 8362643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8115599 |
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| End bp | 8116630 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968587 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003126064 |
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| Protein GI | 256425411 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAATC CTAAACACCG TAGGGAATTT CTCAGGCAAA TGGCATTGTA TACAATGGGA
GCAGGCCTCT TGCCTTCTGT CCTGGCCGCC TGCAACAACG GCGCTTCCAC AAAGGAAAGC
AAAGACAGTA CCAACGTAGC AGGCACCTCT GGCGCTGCTG CGGCGAAGGA GCTGTTCTTT
AAGATCTCTC TGGCAGAATG GTCCTTTCAT GACGCTTTAT TTTCCGGTAA GCTGAATCAC
CTTGACTTCC CCGCAAAAGC AAAGAATGAC TTTGGTATCG AGGCAGTTGA GTATGTGAAT
CAGTTCTTTA AAGATAAAGC TACCGATAAG GCATACCTGG CAGATCTCAA GAAGCGTTGC
AGCGACAATG GTGTGCGTAG TGTACTCATT ATGATTGACG GAGAAGGTGA GATGGGAGAT
CTGGACGTGA AGAAAAGAAC GAAAGCTGTG GAAAATCACT ACAAATGGGT AGAAGCAGCT
GAATATCTGG GTTGTCATGC TATCCGCGTA AATGCAGCGG GAGAGGGCAA ACCAGATGAT
GTATCCAAAG CGGTGATTGA GTCATTGGCT AAATTATCCG GCTTTGCCAA TACACACAAT
ATCAGCGTGA TCGTGGAAAA CCATGGAGGC AGCTCCTCCA ATGGTAAATG GTTATCCAAT
GTAATGAAAC AGGTGAATAT GCCGAACTGC GGTACCTTAC CCGACTTCGG TAACTTTTGC
CTGAATCGTA CCAAACCTGT GGATAATACA CCACAGGGCT GGGCTGCTAC AAAATGCCTG
GAAGAGTATG ATCGTTACGA GGGTGTAACA GAACTGATGC CCTTTGCAAA AGGAGTAAGC
GCTAAAACGC ACGACTTTGA CGCAGAAGGT AACTGTATCG AAACAGACTA TCGCAAGATG
CTAAAAATAG TGAAGGACGC CGGTTATACA GGTCATATCG GAATCGAGTA TGAAGGCACC
AGGCTCTCTG AAGAGGAAGG TGTTCGCAAG ACGCTGGAGT TGCTGAAGAA AGTAGGCGCA
GAAATCAGCT GA
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| Protein sequence | MNNPKHRREF LRQMALYTMG AGLLPSVLAA CNNGASTKES KDSTNVAGTS GAAAAKELFF
KISLAEWSFH DALFSGKLNH LDFPAKAKND FGIEAVEYVN QFFKDKATDK AYLADLKKRC
SDNGVRSVLI MIDGEGEMGD LDVKKRTKAV ENHYKWVEAA EYLGCHAIRV NAAGEGKPDD
VSKAVIESLA KLSGFANTHN ISVIVENHGG SSSNGKWLSN VMKQVNMPNC GTLPDFGNFC
LNRTKPVDNT PQGWAATKCL EEYDRYEGVT ELMPFAKGVS AKTHDFDAEG NCIETDYRKM
LKIVKDAGYT GHIGIEYEGT RLSEEEGVRK TLELLKKVGA EIS
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