| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6425 |
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| Symbol | |
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| ID | 8362609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8071341 |
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| End bp | 8071946 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968553 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003126030 |
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| Protein GI | 256425377 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0103018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCCGATCA ACCAACCATA CGACGAGAGA GAGCTGCTTC TACGTCTGGA AGCTGACGAC
AAATCAGCAT TCGACACGAT CTATTATCGT TACGAGCAAA AGCTAAAACT ATATCTGTTC
CCTTTTACAG GAGGGGATAG TCACCTCGTT GACACCATTC TCCAGGACGT GTTTGTAAAG
CTATGGCTGA AAAGAAAGGA ACTCAGCGGC GTAGCCGTAC TGGAGTTTTA CCTGCAACGC
ATGGCTAAAA ACAGGCTGCT GGATCATCTG AAACTTCGTG ATATCAGGGA AAAGCACGCC
AGGACCTATG CCGATCTCCA GACCGATGCA GGAGATCATA TCAGCGAACA GCTACAACTA
AAGGAATATC TCTCTATCGC CAGAGAAGGC ATCGCACAAC TCCCCTTGCG CCGTCGTATT
ATCTTCTCGA TGAATGTATT GGAAGGCTGG TCTATCGACG AGATTGCCAC CCACTTACAG
GTATCAAAAG ATGTGGTCAA AAAACAGCTG CAACTGGCCA AAACATTCGT CAGAGATTAT
ATATCAAAAA ACGGGGATCT TCCCGGAGCT ATCTGTCTTG CCATCCTGCT GTTACCAGCT
TTTTAA
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| Protein sequence | MPINQPYDER ELLLRLEADD KSAFDTIYYR YEQKLKLYLF PFTGGDSHLV DTILQDVFVK
LWLKRKELSG VAVLEFYLQR MAKNRLLDHL KLRDIREKHA RTYADLQTDA GDHISEQLQL
KEYLSIAREG IAQLPLRRRI IFSMNVLEGW SIDEIATHLQ VSKDVVKKQL QLAKTFVRDY
ISKNGDLPGA ICLAILLLPA F
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