Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6421 |
Symbol | |
ID | 8362605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 8067959 |
End bp | 8068597 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644968549 |
Product | hypothetical protein |
Protein accession | YP_003126026 |
Protein GI | 256425373 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00995636 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAACA ACATCAACAG ATACGCAGAT TTCTTCCCCG AATATGAACT TGAGTATGTG AAAAAGTCTT TCAAGGACAG AACCCCGGTC AGCCCTTTAC ATGCTGGCGA CAGACTGCCT TCTTTTAACA TCAACAGAAA AAATATCATT GCCACTTCCG ATATATTAAA ATCAGTGAAT GGTGTACAGC CTGTAGAACA GTTGCTGGAC CGTCCGCTGG TACTCGTTTT CCACTCTATC CACTGGAATG GTTACGGTGA AAAACTGCTG GAAGACCTGA AAGATATCTA TGCAGATATC CGCGTAATGG GCGGACAGCT GTTACTGGTA ACCGCAGAAG AAAAGAAATA TTTTGACTAT GCGACGGCCT CTTTGCAACT TCCTTTCGCC AGCATCTGGG ATCAGCAGTT TCAGATAGCG CGTAAAGCAG GTAACTACTC CCCTTCTGAT CCGATCTGGG ACAGACTGTC CGGAGTAAAT GAAGATGTGC CTACACCCGC TGTTTATGTA CTGACACCAT CACTGAAAAT AGCTTACAGC TCAGTGGATC TGTACATGGA ACAATCCCTG AACAAAAGAG ATGTATTGTC CGCAGTATAT GATGCGAGTC ACCAGGATTC ACACGGTATC GCGATCTAA
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Protein sequence | MSNNINRYAD FFPEYELEYV KKSFKDRTPV SPLHAGDRLP SFNINRKNII ATSDILKSVN GVQPVEQLLD RPLVLVFHSI HWNGYGEKLL EDLKDIYADI RVMGGQLLLV TAEEKKYFDY ATASLQLPFA SIWDQQFQIA RKAGNYSPSD PIWDRLSGVN EDVPTPAVYV LTPSLKIAYS SVDLYMEQSL NKRDVLSAVY DASHQDSHGI AI
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