Gene Cpin_6421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6421 
Symbol 
ID8362605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8067959 
End bp8068597 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content45% 
IMG OID644968549 
Producthypothetical protein 
Protein accessionYP_003126026 
Protein GI256425373 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00995636 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAACA ACATCAACAG ATACGCAGAT TTCTTCCCCG AATATGAACT TGAGTATGTG 
AAAAAGTCTT TCAAGGACAG AACCCCGGTC AGCCCTTTAC ATGCTGGCGA CAGACTGCCT
TCTTTTAACA TCAACAGAAA AAATATCATT GCCACTTCCG ATATATTAAA ATCAGTGAAT
GGTGTACAGC CTGTAGAACA GTTGCTGGAC CGTCCGCTGG TACTCGTTTT CCACTCTATC
CACTGGAATG GTTACGGTGA AAAACTGCTG GAAGACCTGA AAGATATCTA TGCAGATATC
CGCGTAATGG GCGGACAGCT GTTACTGGTA ACCGCAGAAG AAAAGAAATA TTTTGACTAT
GCGACGGCCT CTTTGCAACT TCCTTTCGCC AGCATCTGGG ATCAGCAGTT TCAGATAGCG
CGTAAAGCAG GTAACTACTC CCCTTCTGAT CCGATCTGGG ACAGACTGTC CGGAGTAAAT
GAAGATGTGC CTACACCCGC TGTTTATGTA CTGACACCAT CACTGAAAAT AGCTTACAGC
TCAGTGGATC TGTACATGGA ACAATCCCTG AACAAAAGAG ATGTATTGTC CGCAGTATAT
GATGCGAGTC ACCAGGATTC ACACGGTATC GCGATCTAA
 
Protein sequence
MSNNINRYAD FFPEYELEYV KKSFKDRTPV SPLHAGDRLP SFNINRKNII ATSDILKSVN 
GVQPVEQLLD RPLVLVFHSI HWNGYGEKLL EDLKDIYADI RVMGGQLLLV TAEEKKYFDY
ATASLQLPFA SIWDQQFQIA RKAGNYSPSD PIWDRLSGVN EDVPTPAVYV LTPSLKIAYS
SVDLYMEQSL NKRDVLSAVY DASHQDSHGI AI