| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6406 |
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| Symbol | |
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| ID | 8362590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8049065 |
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| End bp | 8049823 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644968534 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003126011 |
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| Protein GI | 256425358 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGTAG TCATCATAGA GGATGAAGCG TTGACAGCAG AGGACCTGCG CGAGAGTATA
CTGAAACTGG ATGATACGGT ACAGGTGACA GCTATGCTGA AGTCAGTCAA AGAGGCAGTC
GCTTATTTCA GAACGCACGA AATGCCAGAT CTGATCTTCA GCGATATACA GTTGGGAGAC
GGGGAGAGTT TTGATATTTA CAGGACTGTA GAAGTAACGG CGCCGATCAT CTTTTGCACA
GCGTATGACG AATATGCTTT GCAGGCATTT AAGGCGAATG GTATTGAATA TATTCTGAAA
CCATTTACTG ATGCCACTAT TGCGGATGCA CTCAGGAAAT ATAATACCCT GCGTCGCAGT
TTTGCTGTAA AAGAAACCGG CGCCGGCAAT GCGCTGGACG CTGTATTTGA ACATGCGCCC
AAACCAGCGG CCATACTTGT CCATTACAAG GATAAGATCG TGCCTGTAAG ACTGGATAGC
ATTGTGTTGT TTTATATTGA AAAAGAGACT TTATGCCTGA TGACTTTCGA TCGTCAGCAT
TATTATCTCA AGAAATCACT GGAGGAGGCT GAGCAGCTGT GCGGAGATGT TTTCTTCCGT
GTGAACAGGC AGTTTCTTGT GAACCGTAAA GCCATAAAAG ATGCGTCACA TTACTTATCG
CGCAAGTTAT GCGTTAATCT GAACGTGTCT TTCAGGGAAG TGATTACGGT CAGCAAGGAA
AAGACTCCTC AGTTTTTATC CTGGCTGGGA GAGCGTTGA
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| Protein sequence | MQVVIIEDEA LTAEDLRESI LKLDDTVQVT AMLKSVKEAV AYFRTHEMPD LIFSDIQLGD
GESFDIYRTV EVTAPIIFCT AYDEYALQAF KANGIEYILK PFTDATIADA LRKYNTLRRS
FAVKETGAGN ALDAVFEHAP KPAAILVHYK DKIVPVRLDS IVLFYIEKET LCLMTFDRQH
YYLKKSLEEA EQLCGDVFFR VNRQFLVNRK AIKDASHYLS RKLCVNLNVS FREVITVSKE
KTPQFLSWLG ER
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