| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6367 |
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| Symbol | |
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| ID | 8362551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8003110 |
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| End bp | 8004753 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968495 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003125972 |
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| Protein GI | 256425319 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0017837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA CAAACTATCA TATATATCTG ATCGCCCTTG CCTGTACGCT TTTCGCCGCA
GGTTGTAGTA AAGACTTCCT GAACAGGCCA CCGGAAGACG CTATCGTAGA TGTGAACTTC
TATCAGACGA CTGATCAGAT ACTCGCCGGA ACGGCCCCGC TGTACAACAT TGTATGGTTT
GCTTATAACG ATAAAGCTTC TCATGGTATC GGAGATGGCA GAGCGGGCAT ATTGATGTCG
GGTTCCTACC AGGTGGATAA TATCCGTATG CAGACGACGG ATGTTACACC GGAAGTATAT
AGTTCCTGGA CTTCTTTTTT CAATGTGGTG GCACAGGCCA ATCAGATTAT CAGCAACCTG
GTTACTTATA CAGCGCCGAC GGTACCTGAG AATGTGAAAC AGGCAGGTAT TGCAGAAGGC
CGTTTTATGC GTGGTGTGGC TTATTCTTAC CTGGTACAGA ACTGGGGAGC AGTGCCGATC
ATCGCAGATA ATAAAGTATT GCTGACAGAT ACTTCTATCA GCCGTAATAC TATAGCATCT
GTATGGGAAT TTATCATCCG TGACATCCGT TTTGCCGCAG AAAATCTTCC GGCTGCACCG
ATGCAGAAGG GGCGTCTGAC AAAGTGGGCG GCGGAAGGGA TGCTGGCGAA AATGTACCTG
ACACGCGCCG GTATTTCCGG TTCAAAGAAT CAGACAGATC TGGACAGTGC CGCCTGGTAT
GCCAATGATG TGATTATGAA CAGTGGTGCG GCATTGATGG ATAATTACGA AGACCTCTTC
CTGGTGAAGA ACAACAATAA TTCAGAGAGC CTGTTTGCCT TACAATGGAA GTATGATGGC
GACTGGGGGA CACAGAACAG TGTGCAGGCA TTCCTGGCCT ATGGTTCCGA AATAACAGGA
TTCGGTGATG GTTGGGGAGG AGATCTCGGG GCATCCTTAG ATCAGCTGAA ATTATACAGG
ATAGATGATA AGCGTCGTAA GGGAACGTTC ATGTTCCCTG GTGATCATTA TTCCTATATC
CATCAGTCGG TAGATGATCC CAATAATCCC GGCAAGAAGA TCATACAGGA ATTGCAGGTG
CCCTGGAACT ACGTGGGTAC GGAGCGATAC AATGCAAGGG CATGGGTGAA GAAATATGTG
GTGGGCCGTC CGGAAGATAA TGATGGTAAG GTGACGCAGC AGCATACAGA GATTAATACC
TATATGTTAC GACTTGCGGA TGTATACCTG ATCTATGCGG AAGCATTGCT GGGGAAGTCT
GCTTCTACTA CTAATGCACA GGCATTGCTG TACTTCAATA AGGTGAGAAA AAGAGCGGGT
GTACCTGAAA AGACGGTGCT TACCTGGGAT GATATTTATA TTGAAAGAAG ACTGGAGTTA
GCTATGGAAG GACAGGCCTG GTATGATCTC GTGAGGTTGT ATTACTATGA TCCTGCGAAA
GCGATTTCGC TGATTAATGC GCAGGACAGG GGTACTTATC GTGTTGCTGC CAATGCTGCT
ACGAATGCGA CTTCCTGGAC GATCACTTCT GATGTGCCGG CATTCTACAA TGTGACTCAG
AGCAATTTCC TGTTGCCGTT GCCGGCGGCT GAACTGACTG CTGCACCTAA TTTAAGGAAG
CCCCCGGTAC CTTATCAATT CTAA
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| Protein sequence | MKKTNYHIYL IALACTLFAA GCSKDFLNRP PEDAIVDVNF YQTTDQILAG TAPLYNIVWF
AYNDKASHGI GDGRAGILMS GSYQVDNIRM QTTDVTPEVY SSWTSFFNVV AQANQIISNL
VTYTAPTVPE NVKQAGIAEG RFMRGVAYSY LVQNWGAVPI IADNKVLLTD TSISRNTIAS
VWEFIIRDIR FAAENLPAAP MQKGRLTKWA AEGMLAKMYL TRAGISGSKN QTDLDSAAWY
ANDVIMNSGA ALMDNYEDLF LVKNNNNSES LFALQWKYDG DWGTQNSVQA FLAYGSEITG
FGDGWGGDLG ASLDQLKLYR IDDKRRKGTF MFPGDHYSYI HQSVDDPNNP GKKIIQELQV
PWNYVGTERY NARAWVKKYV VGRPEDNDGK VTQQHTEINT YMLRLADVYL IYAEALLGKS
ASTTNAQALL YFNKVRKRAG VPEKTVLTWD DIYIERRLEL AMEGQAWYDL VRLYYYDPAK
AISLINAQDR GTYRVAANAA TNATSWTITS DVPAFYNVTQ SNFLLPLPAA ELTAAPNLRK
PPVPYQF
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