Gene Cpin_6358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6358 
Symbol 
ID8362542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7993454 
End bp7994362 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content44% 
IMG OID644968486 
Producthypothetical protein 
Protein accessionYP_003125963 
Protein GI256425310 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAACCA TTATCACCTT ATTAAAATTC CTGCTGCTGA GTGAGTACCC CTCCGGCTCT 
GCCATCAGTT ACTATAAAGA CCAGCTGTAT ATCATCGGCG ATGATGCCAG TACACTCCTG
GTACTCGACA GTAATTATCA CGAGGTACGT ACTGTTCCCT TCTTTCATTA TAATGAAAAA
CGGATCCCCA AAGCGCAAAA AGCAGATCTT GAAACAGCTG TCATAATCGG TAAAGACGGG
CAGAAAAACC TGCTTGCGTT GGGATCTGCG GCCACCAGGG AAAGAGAACA GATCATACTA
TACCCTCTTG ATACTACGGA TAGTCAGCCA ACCTATATTT CTTCCACTTC CTTTATCCAA
CGCCTGCAAC AAATACCTGA AATTAATATT GAAGGCGCCA CCCTGGCAGG CCAACACCTG
ATTCTGAGCA ACCGTGGCAA CGAAAGTAAT CCCATCAATC ACCTTATTAT CACGACACCC
GATTTCTGGC AATATCCCGA AAAGGCGCCT CTCCACATTT CAGCCATCAA CATTCCTTTT
GCGCTTCCAG GATTTGCCGG CATCTCGGAA TTGTGTTATA TAGAACAGGA AGACCTGTTA
TTGGTCCTGC TCTCCAGTGA AGCAACCGGA AATGCCTACG ATGACGGTGC CATTGGCGAT
AGCTATATTG CATGGGTGAC CCATTTCAAT GAAAAACTAA ACATCAGAGA TATATGTCTT
GACGGTATCA CTAACCTGTC GGAAATTGAT CCGGCCTTCA AAGGCGAAAA AATGGAAGGC
ATCTGCATCG CTGCTGTAAA AAACAATGAA TGGTACCTCC ACCTTGTTGC AGATAATGAC
AAAGGCGCAA GCAAAATATT TTATATAAAA ATGGCGCCGG ATCAATTGCA TCCATATAAA
AAAAAATGA
 
Protein sequence
MKTIITLLKF LLLSEYPSGS AISYYKDQLY IIGDDASTLL VLDSNYHEVR TVPFFHYNEK 
RIPKAQKADL ETAVIIGKDG QKNLLALGSA ATREREQIIL YPLDTTDSQP TYISSTSFIQ
RLQQIPEINI EGATLAGQHL ILSNRGNESN PINHLIITTP DFWQYPEKAP LHISAINIPF
ALPGFAGISE LCYIEQEDLL LVLLSSEATG NAYDDGAIGD SYIAWVTHFN EKLNIRDICL
DGITNLSEID PAFKGEKMEG ICIAAVKNNE WYLHLVADND KGASKIFYIK MAPDQLHPYK
KK