Gene Cpin_6319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6319 
Symbol 
ID8362501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7958342 
End bp7958791 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content44% 
IMG OID644968446 
Productheat shock protein Hsp20 
Protein accessionYP_003125925 
Protein GI256425272 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTCG TTAAAAGAAC TGCAACCACT CTTCCAGGAT TCCCATCCCT GTTTGATGAC 
TTTTTCAGCC GTGAATTCTT TAACTGGGGC AACAACAATT TTTCATCCAC AAGCACGACT
GTACCATCTG TGAACATTAA GGAAACGGCT GACAGTTATG AGGTGGAAGT AGCCGCCCCT
GGTATGGACA AAAAAGACTT TAATATTACG CTTGACGGCA ATACCCTTAC CATTTCCTCT
GCTAAGCAGC AGACACAGGA GAAAAAAGAT GCTAATTATA CCAGGCGTGA GTTCAGCTAC
CAGTCCTTCC AGCGTAGTTT TGAACTGCCA AAGAACGTGG TGGATGAGGA TAAGATAAAC
GCCCGCTATG ATAATGGCCT GTTACATCTG GTGATTCCTA AAAAGGAAGA CGCTAAACAA
AAGGCGCCAA GGATGATAGA AATTGGCTGA
 
Protein sequence
MSLVKRTATT LPGFPSLFDD FFSREFFNWG NNNFSSTSTT VPSVNIKETA DSYEVEVAAP 
GMDKKDFNIT LDGNTLTISS AKQQTQEKKD ANYTRREFSY QSFQRSFELP KNVVDEDKIN
ARYDNGLLHL VIPKKEDAKQ KAPRMIEIG