| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6312 |
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| Symbol | |
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| ID | 8362494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7952539 |
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| End bp | 7953681 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968439 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003125918 |
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| Protein GI | 256425265 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.874515 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTACC TGCAATCTAT ACTATGCCTG CTTTTCTTAT GCACAATGAC AGACAGACTG
GCGGCACAAT CCACCATCGA CAGAAACCGT GTTATGGAAT ACCTCCAGAA CCTGCAATAC
GATGAGGCCA TTGCCTACCT TCAACCCGGT ATTGATAGTA ACAATCTGCA ACACGTCTCC
CTGCTCGCCT ATACCTATTA CCAGGCCGGC AGGCTCTCCG ATGCCATTAA CCAGTATCAG
CGGGTATTAC AGCTGGACAG TAATCATATC ACCGCCCATC AATACATCGC TTCCATGCAT
ATGCAACAGG AACAACCGTT TTCTGCTATT GAACACTATA AAAGGATCGT TCAGCTACGT
CCGCAGAGCG CCGCCGCATG GAAACAATTA GGCATGGCAG GGTTTACCGC CCGGCAGTCT
GACTCGGCAT TTGTATGGCT GACAAAAGCT TATGACCTGA ATCCTACAGA CGCCAGAGTA
GTAGCCAGAC TGGCAGAAGA ATGGATCGAC AGGAAACGCT TAGGTATGTC AGATACACTG
CTCAATACCT ACTTCGCTAA AGATTCCGGC AGCGCCGTTA TTCTGATGAC AGGCGCCCGT
GTATCTTTTC TCCTGAAAGA TTATAAACGC ACCGTAACGA TAGGGGATAA GCTCAAAACA
CTCAATGTCG CATCTCCCAA CGCATTCCTT TATGTGGCCG CAGCCGCATT CAATCTTAAC
AGATTTAAAG ACTGTATCGC CGTACATGAT TACCTCGCCC TCCGCATGTC CAGTTCGGAA
AATATCATGT ACTACGCCGC TATGTCCTAT ACGCAACTGG GCAAATACCA GGAAAGTAAC
GACCTGTTGC AGACCTGCAT CGACATGGCG AAATCCGTCA GCCTGGATAA CTACTATACC
GGTATGGCCA TTAACTACGA AGCCATGAAA CAATATAAGC CGGCTATTGC CAGTCTGGAT
ACCGCTTATT ACATGTTCCA TCAGCCGCTG AAACAGTATA GTATCGGGCG TATCTATGAC
GCGCATCTGA AAAATGAAGC CATGGCCACC CGTTATTACA AACGATATAT CCAGCTCTAT
AAAGGAGAAA GCACCGAAGA AAAACAGATC TACGATTACC TGAAAACCCG CTTCCAGAAA
TAA
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| Protein sequence | MNYLQSILCL LFLCTMTDRL AAQSTIDRNR VMEYLQNLQY DEAIAYLQPG IDSNNLQHVS
LLAYTYYQAG RLSDAINQYQ RVLQLDSNHI TAHQYIASMH MQQEQPFSAI EHYKRIVQLR
PQSAAAWKQL GMAGFTARQS DSAFVWLTKA YDLNPTDARV VARLAEEWID RKRLGMSDTL
LNTYFAKDSG SAVILMTGAR VSFLLKDYKR TVTIGDKLKT LNVASPNAFL YVAAAAFNLN
RFKDCIAVHD YLALRMSSSE NIMYYAAMSY TQLGKYQESN DLLQTCIDMA KSVSLDNYYT
GMAINYEAMK QYKPAIASLD TAYYMFHQPL KQYSIGRIYD AHLKNEAMAT RYYKRYIQLY
KGESTEEKQI YDYLKTRFQK
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