Gene Cpin_6310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6310 
Symbol 
ID8362492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7949092 
End bp7949889 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content51% 
IMG OID644968437 
Producthypothetical protein 
Protein accessionYP_003125916 
Protein GI256425263 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.639142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATTA AACAACCCGA CCTTAGAACG GTCAATGTGA CCAGGTATGT GACGCCTCTG 
CGGGAAGGAG GTTCCCTGCC TGCCATTGCC GAAGCTGATG ATGGATTCCT GTATGTACTG
AAATTTCGTG GCGCCGGACA AGGAGTCAAA GCCCTGATCG CCGAACTGAT AGGAGGAGAA
GTAGCCCGTA CGCTGGGCAT GAAGATACCG GAGATCGTGT TTGCAAATCT GGATACCGCC
TTCGGACGTA CAGAACCGGA CGAAGAAATA CAGGACCTGC TGAAGGCCAG TGTAGGCTTA
AATCTGGCAC TGCATTATCT CTCAGGCGCC ATTACCTACG ACCCTACCGT CGCTGTAATA
GACCCGCTGA CGGCTTCTCA GATCGTATGG CTGGATTGCC TGCTGACCAA CGTAGACCGT
ACACCCCGTA ATACCAATAT GCTGATGTGG CACCGGGAAC TGTGGCTGAT CGATCATGGC
GCATCCCTGT ATTTCCATCA TTCCTGGGAT AACTGGGAAG AACAGGCCAA ACGTCCTTTC
GTACAGGTAA AAGATCATGT GCTGTTACCA CAGGCTGCAG AACTGGAGAA AGTAGACGCT
GCTTTCCGTG CTATACTGAC AGAAGAACAG ATCCGTGCCA TCGTAGCCGT AGTGCCGGAT
GAATGGCTGC TGACCTTATC GCACCATGGT ACGCCGGAAG AGATCAGAGA GGTATATGCC
CGTTTTTTAA TCACCCGGAT AGCCAATGCC GGAACATTCG TAAATGAAGC GCAAAATGCA
AGAAAAACAC TTATTTGA
 
Protein sequence
MSIKQPDLRT VNVTRYVTPL REGGSLPAIA EADDGFLYVL KFRGAGQGVK ALIAELIGGE 
VARTLGMKIP EIVFANLDTA FGRTEPDEEI QDLLKASVGL NLALHYLSGA ITYDPTVAVI
DPLTASQIVW LDCLLTNVDR TPRNTNMLMW HRELWLIDHG ASLYFHHSWD NWEEQAKRPF
VQVKDHVLLP QAAELEKVDA AFRAILTEEQ IRAIVAVVPD EWLLTLSHHG TPEEIREVYA
RFLITRIANA GTFVNEAQNA RKTLI