| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6288 |
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| Symbol | |
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| ID | 8362470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7922356 |
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| End bp | 7922817 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644968415 |
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| Product | alkylhydroperoxidase like protein, AhpD family |
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| Protein accession | YP_003125894 |
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| Protein GI | 256425241 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00669161 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACAGA GAATCTCTTT ACAGGAAATG CCGGCAGCAC TCATGACTTC ATTAGGGAAG
ATCGGCGCTT ATCTGAAAAC CTGTAATATT GATCAGAAAT TATTATCACT CCTGTATTAC
AGGGCATCGC AAATCAATGG CTGCGCCTGT TGCCTCGATA TTCACCATAA AGAATCCATC
CATTATGGCG ATACACAGGT ACGCCTGCAT GGCGTCATTG CCTGGAGAGA ATCGCCTTAT
TATGATGCAA AGGAACGCGC GGCCCTGGCA TTCACAGAAG CGCTCACCAA TGCGAATCAG
CAGGATATTG ACGATACTAT TTATGATGCA TTGACCGAGC ATTTTACTAC TGAAGAAATC
ACGGAACTGA CCATGGCAAT CGCGACTGTC AATACCTGGA ACAGGCTGAA CAAAACCTTC
AGAACGACGC CCGGTCATTA TAAAGTAGGC CAGTACGCTT AA
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| Protein sequence | MTQRISLQEM PAALMTSLGK IGAYLKTCNI DQKLLSLLYY RASQINGCAC CLDIHHKESI
HYGDTQVRLH GVIAWRESPY YDAKERAALA FTEALTNANQ QDIDDTIYDA LTEHFTTEEI
TELTMAIATV NTWNRLNKTF RTTPGHYKVG QYA
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