| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6273 |
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| Symbol | |
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| ID | 8362455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7906247 |
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| End bp | 7908457 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644968401 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003125880 |
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| Protein GI | 256425227 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000590633 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAAAA TCTTTACAGC AGCCCTTTGT CTGTTAACGC TTGGCGTCTC CGCACAGCAA
TTCAGCGGCA CAGTCTACGA CCGGGAGAGA AACCCCTTAC AGGACGTCAC TATTTACAAC
CAGCGTACCG GTACCCATAC GCATACCAAT GAAGTGGGCG TATTCCGTTT GAAGGACGCC
CAAACCGGCG ACTCTCTGAA AGTTTCGCGG ATGGCTTTTA AAACACAGCT AATCGTTTTA
AAAGAGGCGA ACCAGCGTGT TATCCTCGCG CCATCTGACC TGCAACTGAA CGAAGTAGCC
ATCACCACTT CACTGAAACA CCTCAACATC ATTTCAGACA TTGATCTGAA AACCAATCCC
GTGAAGTCTT CACAGGAACT GCTACGCAAA GTACCGGGCC TGTTCATCGG CCAACATGCC
GGTGGCGGCA AAGCAGAACA GATCTTCCTG CGCGGTTTTG ACATCGACCA CGGAACCGAT
ATCAACATCA GTGTGGACGG TATGCCGGTG AATATGGTCA GTCATGCACA TGGTCAGGGT
TATGCAGACC TCCACTTCCT GATACCGGAG ACCATCGAAA ACATCGACTT TGATAAAGGG
CCTTATCATG CGGATAAGGG CAACCTCGCC ACTGCCGGTT ATGTCGCTTT CAAAACAAGG
GAAAGATTAG ATCACAGCAG TATCACTGTT GAAGGGGGTA AATTCAATAC CTATCGCACC
ATGGGCATGT TCAACCTTGT TAATGATAAT AAGCAGTCCG CCTATGTGGC AGCTGATTAC
CAGATGACAG ACGGATATTT CATTTCTCCG CAGAACTTCA ACCGTATTAA CCTGATCGGC
AAATACACGG CTTATCTCGA TAACAATGAT AAAGTGTCAG TAGCTGTTTC TCATTTCAAC
AGTAAATGGG ACGCCAGCGG ACAGATTCCA CAACGTGCAG TAGATGCAGG TATCATCACA
CGCTTTGGAG CAATCGATAA TACGGAAGGT GGTAATACCG GACGTACCAA TGTGAATCTT
CAATACCTGA AGCATATCGA CGCAAATACG TTCATCAAAA ATACCGCCTA CTACAGCCGT
TATCATTTTG AACTCTATTC CAATTTCACC TTCTTCCTGG AAGATCCCGT GAATGGCGAT
CAGCTCAGAC AAAAAGAAAA CAGGAGCATC TTCGGATTTG AATCGGAACT GAATAAAACC
GTGTACGTAG GAGACAACAC CATCGAACTG AAAGGCGCTG TCGGCTTACG CAATGATGAT
GTCAATGATA TTGAACTATC CCACACCGTC AACAGGAAAA CAACGCTGGA GCAGCTGAAA
CTGGGTGATA TCAATGAAAC GAACCTGTAT GCGTATGTCA GCGCAGATTA TAAATTAGGT
AAATGGTTGA TCAATCCGGC GGTACGTGTC GATCATTTCA AATTTGATTA TGTGGATAAA
CTGGCTGCTA CTTATGCAAC ACAGTCGCAA GGGAAATCTA TCGTGAGTCC AAAGCTGAAC
TTCCTCTATA ATCCGAGCGA CAAAATCCAG TACTTCCTGA AATTAGGAAA GGGATTTCAT
AGCAATGATA CCCGCGTTGT AGTCGAACAG AAAGGTTTAT CCACATTACC GGCCGCCTAT
GGCGCAGATC TGGGTTTGAT CTGGAAACCG GTCTCCAAAC TGGTAGTGAA TACAGCTGTG
TGGTACCTTT ATCTGCAACA GGAATTTGTG TATGTGGGAG ACGCGGGTAT CGTAGAACCC
AGTGGAAAAA CCAGCCGTAA AGGAATCGAT GTCGGCGCCC GTTATCAGCT GGGTAAATGG
ATCTTTATCA ATGGCGACTT TACTTATACA CACGGTCGTG CAACGGAAGA AGCAAAAGGA
GAAAACTATA TTCCTTTAGC TCCGGTGGTC ACAGCTGCAG GTGGTGTTAG TCTGCATCAT
CCTTCCGGCA TCAATGCAGG GATCAATACC CGTTACCTGG GACATCGTCC GGCAAATGAA
GATAACAGCA TTGTCGCGAA AGGATATTGT ATAACTGATG CAAATGTCAG CTATCAGTAT
AAGCAGTTTA CAATTGGCGT CATTACAGAG AATATCTTTA ATACGGCATG GAATGAGACG
CAGTTTGCGA CGGAGAGCAG GTTGAAGGAC GAAGCTGCGC CGGTGACGGA GATACATTTT
ACTCCGGGGA CGCCGTTTAA TGTGAGGGCG ACGTTGAGTT ATAAGTTTTA G
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| Protein sequence | MYKIFTAALC LLTLGVSAQQ FSGTVYDRER NPLQDVTIYN QRTGTHTHTN EVGVFRLKDA
QTGDSLKVSR MAFKTQLIVL KEANQRVILA PSDLQLNEVA ITTSLKHLNI ISDIDLKTNP
VKSSQELLRK VPGLFIGQHA GGGKAEQIFL RGFDIDHGTD INISVDGMPV NMVSHAHGQG
YADLHFLIPE TIENIDFDKG PYHADKGNLA TAGYVAFKTR ERLDHSSITV EGGKFNTYRT
MGMFNLVNDN KQSAYVAADY QMTDGYFISP QNFNRINLIG KYTAYLDNND KVSVAVSHFN
SKWDASGQIP QRAVDAGIIT RFGAIDNTEG GNTGRTNVNL QYLKHIDANT FIKNTAYYSR
YHFELYSNFT FFLEDPVNGD QLRQKENRSI FGFESELNKT VYVGDNTIEL KGAVGLRNDD
VNDIELSHTV NRKTTLEQLK LGDINETNLY AYVSADYKLG KWLINPAVRV DHFKFDYVDK
LAATYATQSQ GKSIVSPKLN FLYNPSDKIQ YFLKLGKGFH SNDTRVVVEQ KGLSTLPAAY
GADLGLIWKP VSKLVVNTAV WYLYLQQEFV YVGDAGIVEP SGKTSRKGID VGARYQLGKW
IFINGDFTYT HGRATEEAKG ENYIPLAPVV TAAGGVSLHH PSGINAGINT RYLGHRPANE
DNSIVAKGYC ITDANVSYQY KQFTIGVITE NIFNTAWNET QFATESRLKD EAAPVTEIHF
TPGTPFNVRA TLSYKF
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