Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6256 |
Symbol | |
ID | 8362438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 7884556 |
End bp | 7885272 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644968384 |
Product | hypothetical protein |
Protein accession | YP_003125863 |
Protein GI | 256425210 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.25364 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACTA CAAAAATCCG TGTGTGGGCA TTACTGGCCC TTGTGACCTT GGTAACAGCT TTAAGCTCCT GTCTGAAAAC TGATCCGGTT ACGCCTTCAA GACCCCAGGC AGGTGTTTCT ATTATTAATG GTATTCTGAC CACCAGCAAT ATGGACTTTT ATGACAATTC ACAGAAAGTG AATCAGAATC CATTGACCAC AGGTTTCCTG TTTGCCGGTT ATGTCATCTA TGGCGGTCCG CGTACTTTCA CCTTTAAGAA AGCCGGTCAG ACAGACGATT ATGCAAAAGT AACCAGCGTA TTTGATTCAC TGACCTACAA TACCATCATC GCATACGGCG ACTCTACCAA TCCTATCATG AGAGCAGTTG AAGATGATTT CAATACCGCC AAAGAAAACT TCGTGAACTT CCGCTTCTTC CACCTGAGCC CGAATATTCC GGCAGTTGAC CTGTATATCG ACAACCAGAA GGTAGACAGC AATCGTGTAT ATGTTGGTAA TGGCGGATTT GACTTCTCTT TCAGACAGCC TAAAAACTCA CTGTTCTCTA ATAATATCAA AGTGAAACTG GCAGGTACGG ACTCCGTACT GGTTGAAAAT ACCGCTCCTA CCCTGAGCTT CACGCCTAAT AAAGTGTACA CCATCGTAAT GTCCGGCGAC AAAGCATTCA GCGATGTGAA GAAACTGAAG GTGAATAACC TGTACAGCCT GTACTAA
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Protein sequence | MTTTKIRVWA LLALVTLVTA LSSCLKTDPV TPSRPQAGVS IINGILTTSN MDFYDNSQKV NQNPLTTGFL FAGYVIYGGP RTFTFKKAGQ TDDYAKVTSV FDSLTYNTII AYGDSTNPIM RAVEDDFNTA KENFVNFRFF HLSPNIPAVD LYIDNQKVDS NRVYVGNGGF DFSFRQPKNS LFSNNIKVKL AGTDSVLVEN TAPTLSFTPN KVYTIVMSGD KAFSDVKKLK VNNLYSLY
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