Gene Cpin_6256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6256 
Symbol 
ID8362438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7884556 
End bp7885272 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content44% 
IMG OID644968384 
Producthypothetical protein 
Protein accessionYP_003125863 
Protein GI256425210 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.25364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACTA CAAAAATCCG TGTGTGGGCA TTACTGGCCC TTGTGACCTT GGTAACAGCT 
TTAAGCTCCT GTCTGAAAAC TGATCCGGTT ACGCCTTCAA GACCCCAGGC AGGTGTTTCT
ATTATTAATG GTATTCTGAC CACCAGCAAT ATGGACTTTT ATGACAATTC ACAGAAAGTG
AATCAGAATC CATTGACCAC AGGTTTCCTG TTTGCCGGTT ATGTCATCTA TGGCGGTCCG
CGTACTTTCA CCTTTAAGAA AGCCGGTCAG ACAGACGATT ATGCAAAAGT AACCAGCGTA
TTTGATTCAC TGACCTACAA TACCATCATC GCATACGGCG ACTCTACCAA TCCTATCATG
AGAGCAGTTG AAGATGATTT CAATACCGCC AAAGAAAACT TCGTGAACTT CCGCTTCTTC
CACCTGAGCC CGAATATTCC GGCAGTTGAC CTGTATATCG ACAACCAGAA GGTAGACAGC
AATCGTGTAT ATGTTGGTAA TGGCGGATTT GACTTCTCTT TCAGACAGCC TAAAAACTCA
CTGTTCTCTA ATAATATCAA AGTGAAACTG GCAGGTACGG ACTCCGTACT GGTTGAAAAT
ACCGCTCCTA CCCTGAGCTT CACGCCTAAT AAAGTGTACA CCATCGTAAT GTCCGGCGAC
AAAGCATTCA GCGATGTGAA GAAACTGAAG GTGAATAACC TGTACAGCCT GTACTAA
 
Protein sequence
MTTTKIRVWA LLALVTLVTA LSSCLKTDPV TPSRPQAGVS IINGILTTSN MDFYDNSQKV 
NQNPLTTGFL FAGYVIYGGP RTFTFKKAGQ TDDYAKVTSV FDSLTYNTII AYGDSTNPIM
RAVEDDFNTA KENFVNFRFF HLSPNIPAVD LYIDNQKVDS NRVYVGNGGF DFSFRQPKNS
LFSNNIKVKL AGTDSVLVEN TAPTLSFTPN KVYTIVMSGD KAFSDVKKLK VNNLYSLY