Gene Cpin_6248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6248 
Symbol 
ID8362430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7873347 
End bp7873790 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content46% 
IMG OID644968376 
Productprotein of unknown function DUF1573 
Protein accessionYP_003125855 
Protein GI256425202 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA TATTCTTCTA CCTGATCGCC GGCAGCCTTT TGGCAGGCGC CTGTAATAGC 
TCAGATGCCG GCAAAAAAGC AGCCCAGGAA ACAAGCGCTG CCGCCGACAC TTCAAAAGGT
ACGCCTGTGA TCGCCTTTGA TGAAATGGTC CATAACTTCG GTAACATTAC AGAAGGCGAA
AGAGTGGAAT ATTCCTTCAA ATTCACAAAT ACCGGAAACG GAGACCTGCT GATAACAGAT
GCTACCTCCA GTTGCGGTTG TACCGTTCCG GACTGGCCGA AAGAACCAAT CAAGCCAGGA
AAGAGCAGCT ACATGAAAGT GGTGTTCAAC AGCGCAGGTA AAGATGGATA TACTGAAAAA
GAAATCATTA TCAGGGCCAA TACAAAGCCT GAACAGGTAC AGGGACCAAA AATCCAGTGT
ACGATAATGA AACAGAAATC ATAA
 
Protein sequence
MKKIFFYLIA GSLLAGACNS SDAGKKAAQE TSAAADTSKG TPVIAFDEMV HNFGNITEGE 
RVEYSFKFTN TGNGDLLITD ATSSCGCTVP DWPKEPIKPG KSSYMKVVFN SAGKDGYTEK
EIIIRANTKP EQVQGPKIQC TIMKQKS