Gene Cpin_6234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6234 
Symbol 
ID8362416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7855399 
End bp7856154 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content47% 
IMG OID644968362 
Producthypothetical protein 
Protein accessionYP_003125841 
Protein GI256425188 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.170418 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTATA AGGTATTTAC ATCTGCTGCT TTATTCCTGG TATCTGCATT TACATATGCG 
CAAAGTGCTG ACGAGATGGT TGACCAGGCG AGACAACTGG AAAAACAAAT GAAAGAGCCA
GCCGCCTTGT CTCTTTACAA AGATGCGCTC AAAGTACAAC CTGATAACAT TGCCGCACTG
ACAGGCGCCA GTGAACTCAG TGCCCGCGAA GGCAGCAGAG CTACCGAAAA GGACGAGAAA
ACACGTAATT ATACCGAAGC AAAAAGTTAT GCAGATCAGG CGATCAAAAT AGCGCCGGAG
AATGCGGAAG CTAATTATGC GATGGCGGTA GCACTGGGTC GTGTTGCGAC CACCCAGGGC
GCGAAGGAAA AGGTCGCCGC TTATAAAGAA GTAAAAAGAT TTGCTGAACT GGCCATCAAG
TTTAACCCTA CCTACGCGAA AGCCTATTAT GTACTGGGCA AACTCAGTTA TGATATGGCG
AATATGAACG CACTGGAAAA GGCGGCAGCA AAAATGCTGT TCGGCGGTTT ACCGGAAGGT
TCACTGGACA ATGCGATCAC CAGTTTTGAA AAATGTCGTA AACTGGATCC CTCCCTGCTG
GTCAACTACC AGGATCTCGC CAAAGCTTAT AAAGACAAGG AAGAACTGGA AAAGTCCATC
GAAGTGTTGC GGAAAGCTGT GACCCTGCGT CCGGTATACC AGGATGATCC GGGTATCAAG
TCCAACTGCA GAAAGATGCT GGAAAGCATG GAGTAA
 
Protein sequence
MFYKVFTSAA LFLVSAFTYA QSADEMVDQA RQLEKQMKEP AALSLYKDAL KVQPDNIAAL 
TGASELSARE GSRATEKDEK TRNYTEAKSY ADQAIKIAPE NAEANYAMAV ALGRVATTQG
AKEKVAAYKE VKRFAELAIK FNPTYAKAYY VLGKLSYDMA NMNALEKAAA KMLFGGLPEG
SLDNAITSFE KCRKLDPSLL VNYQDLAKAY KDKEELEKSI EVLRKAVTLR PVYQDDPGIK
SNCRKMLESM E