Gene Cpin_6218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6218 
Symbol 
ID8362400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7842369 
End bp7842800 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content48% 
IMG OID644968346 
ProductHemerythrin HHE cation binding domain protein 
Protein accessionYP_003125825 
Protein GI256425172 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGTC ATCCGGTCCT GATTCCGTTA TCACAGGAAC ATCAACGTTT ACTGTTCGTT 
TGCCGGTATC TGAAAAATGA TGCCGCCGCT TATGAGGGTT TTCCTCTTGA AACAAATGCC
AAGCTGGCCT ATATCGTAAA AGTATTCCAG GAGGTGATGG TACCACACAT ACAGAAAGAG
GAATATCTCT TTGAAATGTG TACCGGACAT CACCCGGAAA TCGATCAGCT GATACAGGAG
CTGATACGGG AGCACCAGCA GATCTCCCGT ATGTACAGTG CCCTGGCCGA AAATAATGAT
ATGATTGCCG CCATGGACCT CCTGGCCCGC AGCCTGGAAG AACATATCAG GAAAGAAGAG
CGGGTATTAT TTGAAAAGAT CCAGGCGGAA TTGCCCGAAA TCCTGGAACG TATCAAGTGG
GCATCAGCAT GA
 
Protein sequence
MQRHPVLIPL SQEHQRLLFV CRYLKNDAAA YEGFPLETNA KLAYIVKVFQ EVMVPHIQKE 
EYLFEMCTGH HPEIDQLIQE LIREHQQISR MYSALAENND MIAAMDLLAR SLEEHIRKEE
RVLFEKIQAE LPEILERIKW ASA